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ypdB two-component system response regulator YpdB [ Escherichia fergusonii ]

Gene ID: 75058153, updated on 7-Nov-2024

Summary

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Gene symbol
ypdB
Gene description
two-component system response regulator YpdB
Locus tag
LA347_RS10035
Gene type
protein coding
Organism
Escherichia fergusonii (strain: FDAARGOS_1499, culture-collection: DSM:13698, type-material: type strain of Escherichia fergusonii)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Old locus tag
LA347_10035
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Genomic context

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NZ_CP083638.1Genomic Context describing neighboring genes Neighboring gene alanine transaminase Neighboring gene two-component system sensor histidine kinase YpdA Neighboring gene AraC family transcriptional regulator Neighboring gene phosphoenolpyruvate--protein phosphotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP083638.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a target gene and activating stimulus for the YpdA/YpdB histidine kinase/response regulator system in Escherichia coli. Fried L, et al. J Bacteriol, 2013 Feb. PMID 23222720, Free PMC Article
  2. Identification of a novel nutrient-sensing histidine kinase/response regulator network in Escherichia coli. Behr S, et al. J Bacteriol, 2014 Jun. PMID 24659770, Free PMC Article
  3. A genomic epidemiological study shows that prevalence of antimicrobial resistance in Enterobacterales is associated with the livestock host, as well as antimicrobial usage. AbuOun M, et al. Microb Genom, 2021 Oct. PMID 34609275, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
two-component system response regulator YpdB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP083638.1 Reference assembly

    Range
    2078030..2078764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_001298580.1 MULTISPECIES: two-component system response regulator YpdB [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_001298580.1

    UniProtKB/TrEMBL
    A0A0K3L4M2, A0A398TNA9, A0A454A6B0, B1LMH9, B7LL95, W1XIE8
    Conserved Domains (1) summary
    COG3279
    Location:1 → 244
    LytT; DNA-binding response regulator, LytR/AlgR family [Transcription, Signal transduction mechanisms]
Nucleotide Protein
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