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LRCH3 leucine rich repeats and calponin homology domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 722180, updated on 17-Aug-2024

Summary

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Official Symbol
LRCH3provided by VGNC
Official Full Name
leucine rich repeats and calponin homology domain containing 3provided by VGNC
Primary source
VGNC:VGNC:74382
See related
Ensembl:ENSMMUG00000000184
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LRCH3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (285093..386606, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (204436553..204536710)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L35a Neighboring gene IQ motif containing G Neighboring gene U6 spliceosomal RNA Neighboring gene forty-two-three domain containing 1 Neighboring gene microRNA mir-922

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and calponin homology domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    285093..386606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028843512.1 → XP_028699345.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A5F8AAE8
    Related
    ENSMMUP00000037549.3, ENSMMUT00000044535.3
    Conserved Domains (3) summary
    smart00033
    Location:633 → 707
    CH; Calponin homology domain
    COG4886
    Location:77 → 285
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]

  2. XM_015132636.2 → XP_014988122.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A5F7ZRR7, A0A5F8AAE8
    Related
    ENSMMUP00000067332.1, ENSMMUT00000082910.1
    Conserved Domains (4) summary
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00307
    Location:626 → 734
    CH; Calponin homology (CH) domain
    pfam12799
    Location:106 → 144
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:152 → 208
    LRR_8; Leucine rich repeat

  3. XM_015132637.2 → XP_014988123.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X8

    UniProtKB/TrEMBL
    A0A5F8A552
    Conserved Domains (4) summary
    smart00033
    Location:657 → 731
    CH; Calponin homology domain
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:106 → 144
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:152 → 208
    LRR_8; Leucine rich repeat

  4. XM_028843511.1 → XP_028699344.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A5F8A552
    Conserved Domains (3) summary
    smart00033
    Location:657 → 731
    CH; Calponin homology domain
    COG4886
    Location:77 → 285
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]

  5. XM_015132633.2 → XP_014988119.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A1D5R9K1, A0A5F8A552
    Related
    ENSMMUP00000070586.1, ENSMMUT00000094483.1
    Conserved Domains (4) summary
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00307
    Location:650 → 758
    CH; Calponin homology (CH) domain
    pfam12799
    Location:106 → 144
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:152 → 208
    LRR_8; Leucine rich repeat

  6. XM_015132635.2 → XP_014988121.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A1D5QCK2, A0A5F8AAE8
    Related
    ENSMMUP00000045771.2, ENSMMUT00000077599.2
    Conserved Domains (4) summary
    smart00033
    Location:615 → 717
    CH; Calponin homology domain
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:106 → 144
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:152 → 208
    LRR_8; Leucine rich repeat

  7. XM_015132631.2 → XP_014988117.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A5F8A552
    Conserved Domains (4) summary
    smart00033
    Location:639 → 741
    CH; Calponin homology domain
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:106 → 144
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:152 → 208
    LRR_8; Leucine rich repeat

  8. XM_015132632.2 → XP_014988118.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A5F8AAE8
    Conserved Domains (4) summary
    smart00033
    Location:633 → 735
    CH; Calponin homology domain
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:106 → 144
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:152 → 208
    LRR_8; Leucine rich repeat

  9. XM_015132630.2 → XP_014988116.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A5F8A552
    Conserved Domains (4) summary
    smart00033
    Location:657 → 759
    CH; Calponin homology domain
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:106 → 144
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:152 → 208
    LRR_8; Leucine rich repeat

  10. XM_028843513.1 → XP_028699346.1  leucine-rich repeat and calponin homology domain-containing protein 3 isoform X10

    Conserved Domains (2) summary
    COG4886
    Location:77 → 285
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
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