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YBEY ybeY metalloendoribonuclease [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 721807, updated on 17-Aug-2024

Summary

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Official Symbol
YBEYprovided by VGNC
Official Full Name
ybeY metalloendoribonucleaseprovided by VGNC
Primary source
VGNC:VGNC:78866
See related
Ensembl:ENSMMUG00000012911
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
C21orf57
Orthologs
human mouse all
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Genomic context

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See YBEY in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (482048..495951, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (475799..485382, complement)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene pericentrin Neighboring gene uncharacterized LOC114676782 Neighboring gene chromosome 3 C21orf58 homolog Neighboring gene minichromosome maintenance complex component 3 associated protein Neighboring gene uncharacterized LOC106997207 Neighboring gene lanosterol synthase Neighboring gene uncharacterized LOC106997208 Neighboring gene spermatogenesis and centriole associated 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoribonuclease YbeY
Names
rRNA maturation factor homolog
ybeY metallopeptidase (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001265798.1 → NP_001252727.1  endoribonuclease YbeY

    See identical proteins and their annotated locations for NP_001252727.1

    Status: PROVISIONAL

    Source sequence(s)
    JV636225
    UniProtKB/TrEMBL
    F6S0T8, H9EZ73
    Related
    ENSMMUP00000016953.4, ENSMMUT00000018108.4
    Conserved Domains (1) summary
    TIGR00043
    Location:35 → 149
    TIGR00043; rRNA maturation RNase YbeY

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    482048..495951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845074.1 → XP_028700907.1  endoribonuclease YbeY isoform X3

    Conserved Domains (1) summary
    cl00402
    Location:29 → 91
    UPF0054; Uncharacterized protein family UPF0054

  2. XM_028845073.1 → XP_028700906.1  endoribonuclease YbeY isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZYC0
    Related
    ENSMMUP00000070657.1, ENSMMUT00000109411.1
    Conserved Domains (1) summary
    TIGR00043
    Location:35 → 136
    TIGR00043; rRNA maturation RNase YbeY

  3. XM_028845075.1 → XP_028700908.1  endoribonuclease YbeY isoform X5

    UniProtKB/TrEMBL
    G7MM97
    Conserved Domains (1) summary
    TIGR00043
    Location:35 → 136
    TIGR00043; rRNA maturation RNase YbeY

  4. XM_015132654.2 → XP_014988140.1  endoribonuclease YbeY isoform X6

    Conserved Domains (2) summary
    cl00402
    Location:29 → 104
    UPF0054; Uncharacterized protein family UPF0054
    cl26642
    Location:4 → 32
    SBDS_C; SBDS protein C-terminal domain

  5. XM_015132652.2 → XP_014988138.1  endoribonuclease YbeY isoform X4

    UniProtKB/TrEMBL
    F6S0T8, H9EZ73
    Conserved Domains (1) summary
    TIGR00043
    Location:35 → 149
    TIGR00043; rRNA maturation RNase YbeY

  6. XM_015132651.2 → XP_014988137.1  endoribonuclease YbeY isoform X2

    Conserved Domains (1) summary
    TIGR00043
    Location:35 → 140
    TIGR00043; rRNA maturation RNase YbeY

RNA

  1. XR_003727744.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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