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CHADL chondroadherin like [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 721158, updated on 5-Mar-2024

Summary

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Gene symbol
CHADL
Gene description
chondroadherin like
See related
Ensembl:ENSMMUG00000014165
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CHADL in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (10269899..10288859)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) Unplaced Scaffold NW_014877706.1 (6..2875)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114670351 Neighboring gene zinc finger CCCH-type containing 7B Neighboring gene Ran GTPase activating protein 1 Neighboring gene L3MBTL histone methyl-lysine binding protein 2 Neighboring gene uncharacterized LOC114670352 Neighboring gene uncharacterized LOC107000674

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroadherin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    10269899..10288859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028827666.1 → XP_028683499.1  chondroadherin-like protein isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZR43
    Conserved Domains (5) summary
    smart00013
    Location:74 → 106
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:712 → 760
    LRRCT; Leucine rich repeat C-terminal domain
    COG4886
    Location:505 → 714
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:467 → 487
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:201 → 259
    LRR_8; Leucine rich repeat

  2. XM_028827667.1 → XP_028683500.1  chondroadherin-like protein isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZR43, A0A5F8AQW3
    Related
    ENSMMUP00000079304.1, ENSMMUT00000098589.1
    Conserved Domains (5) summary
    smart00013
    Location:74 → 106
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:712 → 760
    LRRCT; Leucine rich repeat C-terminal domain
    COG4886
    Location:505 → 714
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:467 → 487
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:201 → 259
    LRR_8; Leucine rich repeat

RNA

  1. XR_003719855.1 RNA Sequence

  2. XR_003719854.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials