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ATXN3 ataxin 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 720515, updated on 1-Aug-2024

Summary

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Gene symbol
ATXN3
Gene description
ataxin 3
See related
Ensembl:ENSMMUG00000020751
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ATXN3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (154181842..154250636, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (154246691..154307633, complement)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene fibulin 5 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene thyroid hormone receptor interactor 11 Neighboring gene uncharacterized LOC106999545 Neighboring gene uncharacterized LOC114679627 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1 Neighboring gene cleavage and polyadenylation specific factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    154181842..154250636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015144387.2 → XP_014999873.1  ataxin-3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QJ89, H9FUL0
    Related
    ENSMMUP00000058137.1, ENSMMUT00000061760.2
    Conserved Domains (2) summary
    pfam02099
    Location:9 → 163
    Josephin; Josephin
    pfam16619
    Location:264 → 327
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  2. XM_015144391.2 → XP_014999877.1  ataxin-3 isoform X4

    Conserved Domains (2) summary
    pfam02099
    Location:5 → 42
    Josephin; Josephin
    pfam16619
    Location:143 → 206
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  3. XM_015144389.2 → XP_014999875.1  ataxin-3 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QWL7
    Related
    ENSMMUP00000052447.2, ENSMMUT00000055948.2
    Conserved Domains (2) summary
    pfam02099
    Location:9 → 112
    Josephin; Josephin
    pfam16619
    Location:213 → 276
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  4. XM_015144390.2 → XP_014999876.1  ataxin-3 isoform X3

    Related
    ENSMMUP00000027313.4, ENSMMUT00000029191.4
    Conserved Domains (2) summary
    pfam02099
    Location:9 → 163
    Josephin
    pfam16619
    Location:263 → 292
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

RNA

  1. XR_001446407.2 RNA Sequence

  2. XR_001446408.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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