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BRDT bromodomain testis associated [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711998, updated on 17-Aug-2024

Summary

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Official Symbol
BRDTprovided by VGNC
Official Full Name
bromodomain testis associatedprovided by VGNC
Primary source
VGNC:VGNC:70282
See related
Ensembl:ENSMMUG00000014018
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See BRDT in Genome Data Viewer
Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (132168129..132232259, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (92574017..92643494)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidylcholine acyltransferase 2b, pseudogene Neighboring gene epoxide hydrolase 4 Neighboring gene uncharacterized LOC114678196 Neighboring gene transforming growth factor beta receptor 3 Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysine-acetylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain testis-specific protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    132168129..132232259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015144774.2 → XP_015000260.2  bromodomain testis-specific protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1K8, F7AWF3, G7MHW3
    Related
    ENSMMUP00000018423.4, ENSMMUT00000019675.4
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:272 → 373
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17105
    Location:905 → 947
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:509 → 571
    BET; Bromodomain extra-terminal - transcription regulation

  2. XM_015144738.2 → XP_015000224.2  bromodomain testis-specific protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1K8, F7AWF3, G7MHW3
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:272 → 373
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17105
    Location:905 → 947
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:509 → 571
    BET; Bromodomain extra-terminal - transcription regulation

  3. XM_015144730.2 → XP_015000216.2  bromodomain testis-specific protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1K8, F7AWF3, G7MHW3
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:272 → 373
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17105
    Location:905 → 947
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:509 → 571
    BET; Bromodomain extra-terminal - transcription regulation

  4. XM_015144742.2 → XP_015000228.2  bromodomain testis-specific protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1K8, F7AWF3, G7MHW3
    Related
    ENSMMUP00000041920.2, ENSMMUT00000076393.2
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:272 → 373
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17105
    Location:905 → 947
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:509 → 571
    BET; Bromodomain extra-terminal - transcription regulation

  5. XM_015144751.2 → XP_015000237.2  bromodomain testis-specific protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1K8, F7AWF3, G7MHW3
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:272 → 373
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17105
    Location:905 → 947
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:509 → 571
    BET; Bromodomain extra-terminal - transcription regulation

  6. XM_015144758.2 → XP_015000244.2  bromodomain testis-specific protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1K8, F7AWF3, G7MHW3
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:272 → 373
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17105
    Location:905 → 947
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:509 → 571
    BET; Bromodomain extra-terminal - transcription regulation

  7. XM_015144771.2 → XP_015000257.2  bromodomain testis-specific protein isoform X2

    UniProtKB/TrEMBL
    G7MHW3
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    smart00297
    Location:223 → 279
    BROMO; bromo domain
    pfam17105
    Location:808 → 850
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:412 → 474
    BET; Bromodomain extra-terminal - transcription regulation

  8. XM_015144744.2 → XP_015000230.2  bromodomain testis-specific protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q1K8, F7AWF3, G7MHW3
    Conserved Domains (4) summary
    cd05497
    Location:27 → 133
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:272 → 373
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17105
    Location:905 → 947
    BRD4_CDT; C-terminal domain of bromodomain protein 4
    pfam17035
    Location:509 → 571
    BET; Bromodomain extra-terminal - transcription regulation
Nucleotide Protein
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