U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709158, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SMARCC2provided by VGNC
Official Full Name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2provided by VGNC
Primary source
VGNC:VGNC:77652
See related
Ensembl:ENSMMUG00000008273
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SMARCC2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
30
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (55724017..55751384, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (54912311..54939692, complement)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene myosin light chain 6B Neighboring gene myosin light chain 6 Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene ring finger protein 41 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleosomal DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nBAF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of npBAF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
SWI/SNF complex subunit SMARCC2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    55724017..55751384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015151976.2 → XP_015007462.1  SWI/SNF complex subunit SMARCC2 isoform X7

    UniProtKB/TrEMBL
    H9F1T3, H9FYS2
    Conserved Domains (5) summary
    PTZ00121
    Location:721 → 978
    PTZ00121; MAEBL; Provisional
    COG5259
    Location:379 → 739
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    pfam16495
    Location:911 → 977
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:7 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:715 → 779
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal

  2. XM_015151974.2 → XP_015007460.1  SWI/SNF complex subunit SMARCC2 isoform X5

    UniProtKB/TrEMBL
    H9F1T3, I2CXI3
    Related
    ENSMMUP00000041395.1, ENSMMUT00000060069.2
    Conserved Domains (6) summary
    PTZ00121
    Location:721 → 978
    PTZ00121; MAEBL; Provisional
    COG5259
    Location:379 → 739
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    PRK07003
    Location:1006 → 1141
    PRK07003; DNA polymerase III subunit gamma/tau
    pfam16495
    Location:911 → 977
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:7 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:715 → 779
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal

  3. XM_015151972.2 → XP_015007458.1  SWI/SNF complex subunit SMARCC2 isoform X3

    UniProtKB/TrEMBL
    H9EYV8, H9YVZ0
    Related
    ENSMMUP00000044051.1, ENSMMUT00000063299.2
    Conserved Domains (6) summary
    PTZ00121
    Location:690 → 947
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:968 → 1203
    PHA03247; large tegument protein UL36; Provisional
    COG5259
    Location:379 → 708
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    pfam16495
    Location:880 → 946
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:7 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:684 → 748
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal

  4. XM_028829605.1 → XP_028685438.1  SWI/SNF complex subunit SMARCC2 isoform X8

    UniProtKB/TrEMBL
    H9F1T3, H9FYS1
    Conserved Domains (5) summary
    PTZ00121
    Location:690 → 947
    PTZ00121; MAEBL; Provisional
    COG5259
    Location:379 → 708
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    pfam16496
    Location:4 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:684 → 748
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal
    pfam16495
    Location:880 → 946
    SWIRM-assoc_1; SWIRM-associated region 1

  5. XM_015151975.2 → XP_015007461.1  SWI/SNF complex subunit SMARCC2 isoform X6

    UniProtKB/TrEMBL
    H9F1T3
    Conserved Domains (6) summary
    PTZ00121
    Location:720 → 977
    PTZ00121; MAEBL; Provisional
    COG5259
    Location:379 → 738
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    PRK07003
    Location:1005 → 1140
    PRK07003; DNA polymerase III subunit gamma/tau
    pfam16495
    Location:910 → 976
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:7 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:714 → 778
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal

  6. XM_015151969.2 → XP_015007455.1  SWI/SNF complex subunit SMARCC2 isoform X1

    UniProtKB/TrEMBL
    H9EYV8, I0FUE7
    Conserved Domains (6) summary
    PTZ00121
    Location:721 → 978
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:999 → 1234
    PHA03247; large tegument protein UL36; Provisional
    COG5259
    Location:379 → 739
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    pfam16495
    Location:911 → 977
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:7 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:715 → 779
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal

  7. XM_015151973.2 → XP_015007459.1  SWI/SNF complex subunit SMARCC2 isoform X4

    UniProtKB/TrEMBL
    H9EYV8
    Conserved Domains (6) summary
    PTZ00121
    Location:689 → 946
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:967 → 1202
    PHA03247; large tegument protein UL36; Provisional
    COG5259
    Location:379 → 707
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    pfam16495
    Location:879 → 945
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:7 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:683 → 747
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal

  8. XM_015151970.2 → XP_015007456.1  SWI/SNF complex subunit SMARCC2 isoform X2

    UniProtKB/TrEMBL
    A0A1D5RIN8, H9EYV8
    Related
    ENSMMUP00000060182.2, ENSMMUT00000056048.2
    Conserved Domains (6) summary
    PTZ00121
    Location:720 → 977
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:998 → 1233
    PHA03247; large tegument protein UL36; Provisional
    COG5259
    Location:379 → 738
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    pfam16495
    Location:910 → 976
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:7 → 420
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:714 → 778
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal

  9. XM_028829606.1 → XP_028685439.1  SWI/SNF complex subunit SMARCC2 isoform X9

    Conserved Domains (6) summary
    PTZ00121
    Location:470 → 727
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:748 → 983
    PHA03247; large tegument protein UL36; Provisional
    COG5259
    Location:128 → 488
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    pfam16495
    Location:660 → 726
    SWIRM-assoc_1; SWIRM-associated region 1
    pfam16496
    Location:1 → 169
    SWIRM-assoc_2; SWIRM-associated domain at the N-terminal
    pfam16498
    Location:464 → 528
    SWIRM-assoc_3; SWIRM-associated domain at the C-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.