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LRRC28 leucine rich repeat containing 28 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 708649, updated on 17-Aug-2024

Summary

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Official Symbol
LRRC28provided by VGNC
Official Full Name
leucine rich repeat containing 28provided by VGNC
Primary source
VGNC:VGNC:81432
Locus tag
EGK_17880
See related
Ensembl:ENSMMUG00000005226
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LRRC28 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (78454964..78585604)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (77912472..78042623)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene synemin Neighboring gene tetratricopeptide repeat domain 23 Neighboring gene endoplasmin-like Neighboring gene uncharacterized LOC114679268 Neighboring gene myocyte enhancer factor 2A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 28

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257772.1 → NP_001244701.1  leucine-rich repeat-containing protein 28

    See identical proteins and their annotated locations for NP_001244701.1

    Status: PROVISIONAL

    Source sequence(s)
    JU332888
    UniProtKB/TrEMBL
    A0A5F7ZC21, A0A8J8Y6U3, F7C2V5, G7MWA9
    Related
    ENSMMUP00000069725.1, ENSMMUT00000099630.1
    Conserved Domains (2) summary
    PRK15370
    Location:46 → 306
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:43 → 66
    LRR_RI; leucine-rich repeat [structural motif]

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    78454964..78585604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015143127.2 → XP_014998613.1  leucine-rich repeat-containing protein 28 isoform X2

    UniProtKB/TrEMBL
    F7C2V5
    Conserved Domains (2) summary
    sd00033
    Location:43 → 66
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:43 → 100
    LRR_8; Leucine rich repeat

  2. XM_028850369.1 → XP_028706202.1  leucine-rich repeat-containing protein 28 isoform X1

    UniProtKB/TrEMBL
    F7C2V5
    Conserved Domains (2) summary
    PRK15370
    Location:46 → 306
    PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
    sd00033
    Location:43 → 66
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_028850370.1 → XP_028706203.1  leucine-rich repeat-containing protein 28 isoform X3

    Conserved Domains (2) summary
    PRK15370
    Location:3 → 237
    PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
    sd00033
    Location:20 → 42
    LRR_RI; leucine-rich repeat [structural motif]

  4. XM_015143129.2 → XP_014998615.1  leucine-rich repeat-containing protein 28 isoform X4

    UniProtKB/TrEMBL
    F7C2I1, F7C2V5
    Related
    ENSMMUP00000006920.3, ENSMMUT00000007362.4
    Conserved Domains (2) summary
    PRK15370
    Location:3 → 237
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:20 → 42
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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