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CSF1 colony stimulating factor 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702532, updated on 17-Aug-2024

Summary

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Official Symbol
CSF1provided by VGNC
Official Full Name
colony stimulating factor 1provided by VGNC
Primary source
VGNC:VGNC:71513
See related
Ensembl:ENSMMUG00000002680
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CSF1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (114205564..114228972, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (110932997..110949554)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene striatin interacting protein 1 Neighboring gene adenosylhomocysteinase like 1 Neighboring gene uncharacterized LOC114671281 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An Epstein-Barr virus encoded inhibitor of Colony Stimulating Factor-1 signaling is an important determinant for acute and persistent EBV infection. Ohashi M, et al. PLoS Pathog, 2012 Dec. PMID 23300447, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of macrophage differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
macrophage colony-stimulating factor 1
XP_028686403.1
XP_028686409.1
XP_028686413.1
XP_028686417.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    114205564..114228972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028830580.1 → XP_028686413.1  macrophage colony-stimulating factor 1 isoform X2

    UniProtKB/TrEMBL
    H9FQ89
    Conserved Domains (1) summary
    pfam05337
    Location:41 → 179
    CSF-1; Macrophage colony stimulating factor-1 (CSF-1)

  2. XM_028830570.1 → XP_028686403.1  macrophage colony-stimulating factor 1 isoform X1

    UniProtKB/TrEMBL
    F7HQ06, F7HQ08, H9FQ90, H9Z5H1
    Related
    ENSMMUP00000003609.4, ENSMMUT00000003818.4
    Conserved Domains (2) summary
    PHA03307
    Location:194 → 492
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam05337
    Location:41 → 179
    CSF-1; Macrophage colony stimulating factor-1 (CSF-1)

  3. XM_028830584.1 → XP_028686417.1  macrophage colony-stimulating factor 1 isoform X2

    UniProtKB/TrEMBL
    H9FQ89
    Conserved Domains (1) summary
    pfam05337
    Location:41 → 179
    CSF-1; Macrophage colony stimulating factor-1 (CSF-1)

  4. XM_028830576.1 → XP_028686409.1  macrophage colony-stimulating factor 1 isoform X1

    UniProtKB/TrEMBL
    F7HQ06, F7HQ08, H9FQ90, H9Z5H1
    Related
    ENSMMUP00000003610.2, ENSMMUT00000003819.3
    Conserved Domains (2) summary
    PHA03307
    Location:194 → 492
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam05337
    Location:41 → 179
    CSF-1; Macrophage colony stimulating factor-1 (CSF-1)
Nucleotide Protein
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