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L3HYPDH trans-L-3-hydroxyproline dehydratase [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702076, updated on 17-Aug-2024

Summary

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Official Symbol
L3HYPDHprovided by VGNC
Official Full Name
trans-L-3-hydroxyproline dehydrataseprovided by VGNC
Primary source
VGNC:VGNC:74089
See related
Ensembl:ENSMMUG00000008717
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See L3HYPDH in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (121553246..121584407, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (121437124..121466119, complement)

Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene aldose reductase pseudogene Neighboring gene dishevelled associated activator of morphogenesis 1 Neighboring gene G protein-coupled receptor 135 Neighboring gene JNK1/MAPK8 associated membrane protein Neighboring gene coiled-coil domain containing 175 Neighboring gene reticulon 1 Neighboring gene 40S ribosomal protein S4, X isoform-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydro-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trans-3-hydroxy-L-proline dehydratase
Names
putative proline racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041760.1 Reference Mmul_10 Primary Assembly

    Range
    121553246..121584407 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001094065.4 → XP_001094065.2  trans-3-hydroxy-L-proline dehydratase isoform X1

    UniProtKB/TrEMBL
    A0A1D5QWA4, H9F5H4
    Related
    ENSMMUP00000052334.2, ENSMMUT00000070764.2
    Conserved Domains (1) summary
    pfam05544
    Location:22 → 352
    Pro_racemase; Proline racemase

  2. XM_028851577.1 → XP_028707410.1  trans-3-hydroxy-L-proline dehydratase isoform X2

    Conserved Domains (1) summary
    pfam05544
    Location:1 → 181
    Pro_racemase; Proline racemase

RNA

  1. XR_003731599.1 RNA Sequence

  2. XR_003731600.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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