U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PCDH11X protocadherin 11 X-linked [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 696659, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PCDH11X
Gene description
protocadherin 11 X-linked
See related
Ensembl:ENSMMUG00000012777
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PCDH11X in Genome Data Viewer
Location:
chromosome: X
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (88526120..89309219)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (85856029..86689461)

Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene poly(A) binding protein cytoplasmic 5 Neighboring gene uncharacterized LOC114674993 Neighboring gene formin-like protein 1 Neighboring gene U2 spliceosomal RNA Neighboring gene voltage-dependent anion-selective channel protein 1 pseudogene Neighboring gene DDB1- and CUL4-associated factor 13 Neighboring gene peptide chain release factor 1-like, mitochondrial pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protocadherin-11 X-linked

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041774.1 Reference Mmul_10 Primary Assembly

    Range
    88526120..89309219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015127772.2 → XP_014983258.1  protocadherin-11 X-linked isoform X5

    UniProtKB/TrEMBL
    A0A1D5Q352, H9FT28
    Related
    ENSMMUP00000042464.1, ENSMMUT00000076375.2
    Conserved Domains (5) summary
    cd11304
    Location:253 → 351
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:384 → 464
    CA; Cadherin repeats
    pfam08374
    Location:775 → 976
    Protocadherin; Protocadherin
    pfam14650
    Location:1174 → 1277
    FAM75; FAM75 family
    cl09101
    Location:28 → 97
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  2. XM_028842285.1 → XP_028698118.1  protocadherin-11 X-linked isoform X1

    UniProtKB/TrEMBL
    H9FT28
    Conserved Domains (5) summary
    cd11304
    Location:282 → 380
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:413 → 493
    CA; Cadherin repeats
    pfam08374
    Location:804 → 1005
    Protocadherin
    pfam14642
    Location:1225 → 1294
    FAM47; FAM47 family
    pfam08266
    Location:57 → 126
    Cadherin_2; Cadherin-like

  3. XM_028842286.1 → XP_028698119.1  protocadherin-11 X-linked isoform X2

    UniProtKB/TrEMBL
    A0A1D5QNE1
    Related
    ENSMMUP00000049567.1, ENSMMUT00000068639.2
    Conserved Domains (5) summary
    cd11304
    Location:282 → 380
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:413 → 493
    CA; Cadherin repeats
    pfam08374
    Location:804 → 1005
    Protocadherin
    pfam14642
    Location:1217 → 1286
    FAM47; FAM47 family
    pfam08266
    Location:57 → 126
    Cadherin_2; Cadherin-like

  4. XM_028842287.1 → XP_028698120.1  protocadherin-11 X-linked isoform X3

    UniProtKB/TrEMBL
    H9FT28
    Conserved Domains (5) summary
    cd11304
    Location:282 → 380
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:413 → 493
    CA; Cadherin repeats
    pfam08374
    Location:804 → 1005
    Protocadherin
    pfam14642
    Location:1215 → 1284
    FAM47; FAM47 family
    pfam08266
    Location:57 → 126
    Cadherin_2; Cadherin-like

  5. XM_028842288.1 → XP_028698121.1  protocadherin-11 X-linked isoform X4

    UniProtKB/TrEMBL
    G7NSE5
    Conserved Domains (5) summary
    cd11304
    Location:282 → 380
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:413 → 493
    CA; Cadherin repeats
    pfam08374
    Location:804 → 1005
    Protocadherin
    pfam14642
    Location:1207 → 1276
    FAM47; FAM47 family
    pfam08266
    Location:57 → 126
    Cadherin_2; Cadherin-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.