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Gm7072 predicted gene 7072 [ Mus musculus (house mouse) ]

Gene ID: 631624, updated on 4-Jan-2025

Summary

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Official Symbol
Gm7072provided by MGI
Official Full Name
predicted gene 7072provided by MGI
Primary source
MGI:MGI:3648314
See related
Ensembl:ENSMUSG00000117284 AllianceGenome:MGI:3648314
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG631624
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Broad expression in bladder adult (RPKM 3.2), CNS E18 (RPKM 3.1) and 24 other tissues See more
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Genomic context

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See Gm7072 in Genome Data Viewer
Location:
17 A3.3; 17 11.4 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (22504852..22539853, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (22285871..22319979, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 52309 Neighboring gene sorting nexin 4 pseudogene Neighboring gene zinc finger protein 994 Neighboring gene STARR-seq mESC enhancer starr_42025 Neighboring gene STARR-positive B cell enhancer ABC_E4195 Neighboring gene STARR-seq mESC enhancer starr_42027 Neighboring gene STARR-seq mESC enhancer starr_42028 Neighboring gene predicted gene, 53992 Neighboring gene zinc finger protein 944 Neighboring gene STARR-positive B cell enhancer ABC_E5576 Neighboring gene STARR-seq mESC enhancer starr_42030 Neighboring gene zinc finger protein 758 Neighboring gene STARR-seq mESC enhancer starr_42031 Neighboring gene STARR-positive B cell enhancer ABC_E5577 Neighboring gene STARR-seq mESC enhancer starr_42032 Neighboring gene zinc finger protein 946

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC631624

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357991.1 → NP_001344920.1  uncharacterized protein LOC631624

    Status: VALIDATED

    Source sequence(s)
    CT030661
    Consensus CDS
    CCDS89002.1
    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  2. NM_001357992.1 → NP_001344921.1  uncharacterized protein LOC631624

    Status: VALIDATED

    Source sequence(s)
    CT030661
    Consensus CDS
    CCDS89002.1
    UniProtKB/TrEMBL
    A0A3B2WCF4
    Related
    ENSMUSP00000156489.2, ENSMUST00000233465.2
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    22504852..22539853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030249943.2 → XP_030105803.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  2. XM_036160725.1 → XP_036016618.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  3. XM_030249959.1 → XP_030105819.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_030249945.2 → XP_030105805.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  5. XM_030249947.2 → XP_030105807.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  6. XM_030249953.2 → XP_030105813.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  7. XM_036160730.1 → XP_036016623.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_030249956.2 → XP_030105816.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]

  9. XM_030249957.2 → XP_030105817.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]

  10. XM_030249946.2 → XP_030105806.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  11. XM_030249950.2 → XP_030105810.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  12. XM_030249960.2 → XP_030105820.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]

  13. XM_030249958.2 → XP_030105818.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]

  14. XM_036160726.1 → XP_036016619.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  15. XM_030249951.2 → XP_030105811.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  16. XM_030249948.2 → XP_030105808.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  17. XM_036160729.1 → XP_036016622.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  18. XM_030249949.2 → XP_030105809.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  19. XM_036160727.1 → XP_036016620.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  20. XM_030249952.2 → XP_030105812.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  21. XM_036160728.1 → XP_036016621.1  uncharacterized protein LOC631624 isoform X1

    UniProtKB/TrEMBL
    A0A3B2WCF4
    Conserved Domains (4) summary
    COG5048
    Location:209 → 650
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:605 → 625
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:13 → 52
    KRAB; KRAB box
    pfam13465
    Location:645 → 669
    zf-H2C2_2; Zinc-finger double domain

  22. XM_030249954.1 → XP_030105814.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]

  23. XM_030249961.1 → XP_030105821.1  uncharacterized protein LOC631624 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:171 → 612
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:567 → 587
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
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