zgc:162964 zgc:162964 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:162964provided by ZNC
Official Full Name: zgc:162964provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-9798
See related: Ensembl:ENSDARG00000024602 AllianceGenome:ZFIN:ZDB-GENE-030131-9798
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb366; GOLPH1; sb:cb366; wu:fa04b12; wu:fd14b03; wu:fi29h06
Summary: Predicted to enable fatty-acyl-CoA binding activity. Predicted to be active in Golgi membrane. Is expressed in EVL; hatching gland; notochord; periderm; and polster. Orthologous to human ACBD3 (acyl-CoA binding domain containing 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 17

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (33375378..33387709)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (33423099..33434079)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AW154591 (e-PCR)
- UniSTS:205903

fd14b03.x1 (e-PCR)
- UniSTS:204159

fa04b12.s1 (e-PCR)
- UniSTS:202190

fj94f09.x1 (e-PCR)
- UniSTS:200402

fi29h06.x1 (e-PCR)
- UniSTS:204538

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables fatty-acyl-CoA binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in Golgi membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC560569

Names: acyl-Coenzyme A binding domain containing 3; golgi resident protein GCP60

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.