parp12b poly (ADP-ribose) polymerase family, member 12b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: parp12bprovided by ZNC
Official Full Name: poly (ADP-ribose) polymerase family, member 12bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-2617
See related: Ensembl:ENSDARG00000057974 AllianceGenome:ZFIN:ZDB-GENE-030131-2617
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc13d08; fj90e08; wu:fc13d08; wu:fj90e08; zgc:110593; si:dkeyp-27e10.4
Summary: Predicted to enable NAD+-protein poly-ADP-ribosyltransferase activity. Predicted to be active in nucleus. Orthologous to human PARP12 (poly(ADP-ribose) polymerase family member 12). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 4

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (9813731..9822519, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (9812815..9821603, complement)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables NAD+-protein ADP-ribosyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables NAD+-protein poly-ADP-ribosyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: protein mono-ADP-ribosyltransferase PARP12b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001115086.1 → NP_001108558.1 protein mono-ADP-ribosyltransferase PARP12b

Status: PROVISIONAL

Source sequence(s)

BX649444

UniProtKB/TrEMBL

A0A8M1NHX3, Q1LVS6

Related

ENSDARP00000120125.2, ENSDART00000131357.3

Conserved Domains (2) summary

pfam02825
Location:355 → 425

WWE; WWE domain

cl02729
Location:286 → 349

WWE; WWE domain