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T24H7.9 GyrI-like small molecule binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 43578489, updated on 14-Nov-2024

Summary

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Official Symbol
T24H7.9
Official Full Name
GyrI-like small molecule binding domain-containing protein
Primary source
WormBase:WBGene00305157
Locus tag
CELE_T24H7.9
See related
AllianceGenome:WB:WBGene00305157
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in sterol metabolic process. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T24H7.9 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (6234484..6235505, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Phospholipid-transporting ATPase Neighboring gene Small vasohibin-binding protein Neighboring gene Biogenesis of lysosome-related organelles complex 1 subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An unexpectedly high degree of specialization and a widespread involvement in sterol metabolism among the C. elegans putative aminophospholipid translocases. Lyssenko NN, et al. BMC Dev Biol, 2008 Oct 2. PMID 18831765, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in protein-DNA covalent cross-linking repair IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in reticulophagy IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in sterol metabolic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in sterol metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in autophagosome membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in replication fork IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
GyrI-like small molecule binding domain-containing protein
NP_001379746.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    6234484..6235505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001393095.1 → NP_001379746.1  GyrI-like small molecule binding domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JPE4
    Conserved Domains (1) summary
    pfam06445
    Location:43 → 189
    GyrI-like; GyrI-like small molecule binding domain
Nucleotide Protein
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