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CG12983 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40319, updated on 9-Dec-2024

Summary

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Official Symbol
CG12983provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0037040
Locus tag
Dmel_CG12983
See related
AllianceGenome:FB:FBgn0037040
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
bs29a07.y1; Dmel\CG12983; NEST:bs29a07
Summary
Predicted to enable beta-tubulin binding activity and microtubule binding activity. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG12983 in Genome Data Viewer
Location:
78A1-78A1; 3-47 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20962655..20966762, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20955755..20959862, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Microgravity simulation by diamagnetic levitation: effects of a strong gradient magnetic field on the transcriptional profile of Drosophila melanogaster. Herranz R, et al. BMC Genomics, 2012 Feb 1. PMID 22296880, Free PMC Article
  2. Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis. Andrews J, et al. Genome Res, 2000 Dec. PMID 11116097, Free PMC Article
  3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
  4. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
  5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables beta-tubulin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG12983-PB
CG12983-PC
CG12983-PD
CG12983-PE
CG12983-PF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    20962655..20966762 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001259924.1 → NP_001246853.1  uncharacterized protein Dmel_CG12983, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246853.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3LF57, M9NDE2
    Conserved Domains (1) summary
    pfam15927
    Location:21 → 89
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  2. NM_001275204.1 → NP_001262133.1  uncharacterized protein Dmel_CG12983, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262133.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3LF57, M9PID5
    Conserved Domains (1) summary
    pfam15927
    Location:21 → 89
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  3. NM_001144519.3 → NP_001137991.1  uncharacterized protein Dmel_CG12983, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137991.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3LF57, B7Z094
    Conserved Domains (1) summary
    pfam15927
    Location:21 → 89
    Casc1_N; Cancer susceptibility candidate 1 N-terminus

  4. NM_001144520.2 → NP_001137992.1  uncharacterized protein Dmel_CG12983, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137992.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z092
    Conserved Domains (1) summary
    pfam12366
    Location:839 → 1054
    Casc1; Cancer susceptibility candidate 1

  5. NM_001144518.3 → NP_001137990.1  uncharacterized protein Dmel_CG12983, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137990.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z093
    Conserved Domains (1) summary
    pfam15927
    Location:21 → 89
    Casc1_N; Cancer susceptibility candidate 1 N-terminus
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B7Z092 B7Z092
B7Z093 B7Z093
B7Z094 B7Z094
M9NDE2 M9NDE2
M9PID5 M9PID5
Q8MRS7 Q8MRS7

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