U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TM35_002131000 ABC transporter [ Trypanosoma theileri ]

Gene ID: 39991804, updated on 29-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
TM35_002131000
Gene description
ABC transporter
Locus tag
TM35_002131000
See related
TriTrypDB:TM35_002131000; VEuPathDB:TM35_002131000
Gene type
protein coding
RNA name
ABC transporter
RefSeq status
PROVISIONAL
Organism
Trypanosoma theileri (isolate: Edinburgh, nat-host: Bos taurus)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
Orthologs
Trypanosoma brucei all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TM35_002131000 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_021640055.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_021640055.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

  • Tth.213.1000

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ABC transporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_021640055.1 Reference assembly

    Range
    198..3911
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029032024.1 → XP_028876682.1  ABC transporter [Trypanosoma theileri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X0ND40
    Conserved Domains (1) summary
    cl25403
    Location:955 → 1220
    ABC_ATPase; ATP-binding cassette transporter nucleotide-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases