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bip1 bip1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38891, updated on 9-Dec-2024

Summary

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Official Symbol
bip1provided by FlyBase
Official Full Name
bip1provided by FlyBase
Primary source
FLYBASE:FBgn0026263
Locus tag
Dmel_CG7574
See related
AllianceGenome:FB:FBgn0026263
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0118547.246; bip-I; Bip1; CG7574; Dmel\CG7574
Summary
Involved in larval lymph gland hemopoiesis. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See bip1 in Genome Data Viewer
Location:
66B3-66B3; 3-22 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (8054333..8058713, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (8047433..8051813, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene POP4 ribonuclease P/MRP subunit Neighboring gene nemo Neighboring gene transfer RNA:Alanine-AGC 2-1 Neighboring gene transfer RNA:Leucine-CAG 1-2 Neighboring gene transfer RNA:Leucine-CAG 1-3 Neighboring gene antisense RNA:CR45867 Neighboring gene antisense RNA:CR45868

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The BTB/POZ domain of the regulatory proteins Bric à brac 1 (BAB1) and Bric à brac 2 (BAB2) interacts with the novel Drosophila TAF(II) factor BIP2/dTAF(II)155. Pointud JC, et al. Dev Biol, 2001 Sep 15. PMID 11543621
  2. Sudestada1, a Drosophila ribosomal prolyl-hydroxylase required for mRNA translation, cell homeostasis, and organ growth. Katz MJ, et al. Proc Natl Acad Sci U S A, 2014 Mar 18. PMID 24550463, Free PMC Article
  3. Two distinct waves of transcriptome and translatome changes drive Drosophila germline stem cell differentiation. Samuels TJ, et al. EMBO J, 2024 Apr. PMID 38480936, Free PMC Article
  4. Pvr expression regulators in equilibrium signal control and maintenance of Drosophila blood progenitors. Mondal BC, et al. Elife, 2014 Sep 8. PMID 25201876, Free PMC Article
  5. Parallel genetic and proteomic screens identify Msps as a CLASP-Abl pathway interactor in Drosophila. Lowery LA, et al. Genetics, 2010 Aug. PMID 20498300, Free PMC Article

See all (37) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in larval lymph gland hemopoiesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
bip1
Names
Bab interating protein 1
CG7574-PA
CG7574-PB
bip1-PA
bip1-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    8054333..8058713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_139912.5 → NP_648169.2  bip1, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648169.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V457, Q9XZU6
    Related
    FBpp0076462
    Conserved Domains (1) summary
    smart00980
    Location:34 → 91
    THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion

  2. NM_001169904.2 → NP_001163375.1  bip1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163375.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C6SV53
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
C6SV53 C6SV53
Q8T9I2 Q8T9I2
Q9V457 Q9V457
Q9XZU6 Q9XZU6

Gene LinkOut

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