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FRS1 phenylalanine--tRNA ligase subunit beta [ Nakaseomyces glabratus ]

Gene ID: 2887944, updated on 6-Dec-2024

Summary

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Gene symbol
FRS1
Gene description
phenylalanine--tRNA ligase subunit beta
Locus tag
GVI51_F01463
See related
FungiDB:GVI51_F01463; VEuPathDB:GVI51_F01463
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See FRS1 in Genome Data Viewer
Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_088956.1 (191918..193705, complement)

Chromosome F - NC_088956.1Genomic Context describing neighboring genes Neighboring gene 25S rRNA (uracil2843-N3)-methyltransferase Neighboring gene 60S ribosomal protein eL22 Neighboring gene uncharacterized protein Neighboring gene glycine hydroxymethyltransferase SHM2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088956.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0F01705g
    Putative cytosolic phenylalanyl-tRNA synthetase, alpha subunit

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phenylalanine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phenylalanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phenylalanine-tRNA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phenylalanine--tRNA ligase subunit beta
XP_446046.1
  • CAGL0F01705g
    Putative cytosolic phenylalanyl-tRNA synthetase, alpha subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088956.1 Reference assembly

    Range
    191918..193705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_446046.1 → XP_446046.1  phenylalanine--tRNA ligase subunit beta [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_446046.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0W0DGJ9, Q6FUP8
    Conserved Domains (1) summary
    PLN02265
    Location:1 → 595
    PLN02265; probable phenylalanyl-tRNA synthetase beta chain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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