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LOC123230339 cyclin-D1-1-like [ Mangifera indica (mango) ]

Gene ID: 123230339, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123230339
Gene description
cyclin-D1-1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123230339 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 1 NC_058137.1 (20297521..20298987, complement)

Chromosome 1 - NC_058137.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123221463 Neighboring gene glycosyltransferase 6-like Neighboring gene uncharacterized LOC123209271 Neighboring gene probable amino-acid acetyltransferase NAGS2, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058137.1 Chromosome 1 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic cell cycle phase transition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin-dependent protein kinase holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-D1-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058137.1 Reference CATAS_Mindica_2.1

    Range
    20297521..20298987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044656528.1 → XP_044512463.1  cyclin-D1-1-like

    Conserved Domains (2) summary
    TIGR00569
    Location:104 → 237
    ccl1; cyclin ccl1
    smart00385
    Location:82 → 167
    CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma
Nucleotide Protein
Heading Accession and Version

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