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si:dkeyp-82a1.1 si:dkeyp-82a1.1 [ Danio rerio (zebrafish) ]

Gene ID: 101886381, updated on 12-Sep-2024

Summary

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Official Symbol
si:dkeyp-82a1.1provided by ZNC
Official Full Name
si:dkeyp-82a1.1provided by ZNC
Primary source
ZFIN:ZDB-GENE-081105-23
See related
Ensembl:ENSDARG00000093386 AllianceGenome:ZFIN:ZDB-GENE-081105-23
Gene type
ncRNA
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See si:dkeyp-82a1.1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (20950451..20954002)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (20918270..20921894)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene HAUS augmin-like complex, subunit 5 Neighboring gene si:ch73-196i15.5 Neighboring gene integumentary mucin C.1 Neighboring gene uncharacterized LOC110440008 Neighboring gene putative ferric-chelate reductase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    20950451..20954002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_011016579.1 RNA Sequence

  2. XR_002459376.2 RNA Sequence

  3. XR_011016578.1 RNA Sequence

    Related
    ENSDART00000144929.3

  4. XR_002459377.2 RNA Sequence

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394720.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    2732..6283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_011009704.1 RNA Sequence

  2. XR_223959.5 RNA Sequence

  3. XR_011009703.1 RNA Sequence

  4. XR_002457179.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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