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NCBI Reference Sequence: XR_011009704.1
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LOCUS XR_011009704 1171 bp RNA linear VRT 08-SEP-2024 DEFINITION PREDICTED: Danio rerio si:dkeyp-82a1.1 (si:dkeyp-82a1.1), transcript variant X3, ncRNA. ACCESSION XR_011009704 VERSION XR_011009704.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018394720.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_000002035.6-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/15/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1171 /organism="Danio rerio" /mol_type="transcribed RNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="8" /map="unlocalized" gene 1..1171 /gene="si:dkeyp-82a1.1" /note="si:dkeyp-82a1.1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns" /db_xref="GeneID:101886381" /db_xref="ZFIN:ZDB-GENE-081105-23" ncRNA 1..1171 /ncRNA_class="lncRNA" /gene="si:dkeyp-82a1.1" /product="si:dkeyp-82a1.1, transcript variant X3" /experiment="COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]" /db_xref="GeneID:101886381" /db_xref="ZFIN:ZDB-GENE-081105-23" ORIGIN 1 ggatcatgga tgcgctaatg gacgacacgg atgacaagga aagtgccatc gtacatcctc 61 tgggtgtctt gaggagctgg tctttggata atgctgagca ggtctttctt tctggtaaag 121 attattatta cagtgaagta aaagaattta acagacagat ttacaaacaa ctgacgaaag 181 aagggagacc attcaatagt ccctttattt atcaggggtt gccacagcag aaggaactgc 241 caacttatcc agcatatgtt ttacacagcg gatgcccttc cagctgcaac ccagtactgg 301 gaaacaccca tttacactca tacacttgaa catggggaga acatgcaaac tccacacaga 361 aatgaccact ggcccagccg gggcttgaac cagcaacctt cttgctgtga agcgacggtg 421 ctaaccactg tgctgcccta tgtgctctat gcgggtgagt gggattgaca aaccacttgg 481 agggaacact cttgctgtct taaccagaca ttttgttata aataatcatg tgcgtttcat 541 gtttattcat ataactgcta ttttatctct tagcacttca tttttgtctt gatatttaat 601 atctcttgtt taaatacact atgaacagca gctgcgctaa ttattttcct tgttccctat 661 ttccacctgg ggatattcat ccagaggcct ctagagatcg taacctgtga agagatgatg 721 ccaccataga ggacttctaa atgtatccat aatcctgaaa cagaccgtat catgagcaga 781 tgctgtggtg gtcatggaga agtggagagc atgagactga ttaatgaaag accccagtga 841 cagatgagtg cccacattga ccctgtggtc cagcctgaaa accagctggt gacctactca 901 cacctgcagc ttctctatga tggacgccca gtgtttgcct ccagcgccta gactgcagct 961 ctgcatgtga agtgtggcca gaagagaaat ggttgttccc aactgagcct agtttctctc 1021 aaggtttatt ccttcccttt catcaattgg agctaaagtc tacagccagt ctgaatgcag 1081 caactgaata aacagtgggg tcaattttgt ggttgaattg cattaataaa aaaaaagtgt 1141 ggatatttat ataaatgtac attcttgaat c //
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