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PREDICTED: Danio rerio si:dkeyp-82a1.1 (si:dkeyp-82a1.1), transcript variant X3, ncRNA

NCBI Reference Sequence: XR_011009704.1

FASTA Graphics 

LOCUS       XR_011009704            1171 bp    RNA     linear   VRT 08-SEP-2024
DEFINITION  PREDICTED: Danio rerio si:dkeyp-82a1.1 (si:dkeyp-82a1.1),
            transcript variant X3, ncRNA.
ACCESSION   XR_011009704
VERSION     XR_011009704.1
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018394720.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_000002035.6-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/15/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Danio rerio"
                     /mol_type="transcribed RNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="8"
                     /map="unlocalized"
     gene            1..1171
                     /gene="si:dkeyp-82a1.1"
                     /note="si:dkeyp-82a1.1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:101886381"
                     /db_xref="ZFIN:ZDB-GENE-081105-23"
     ncRNA           1..1171
                     /ncRNA_class="lncRNA"
                     /gene="si:dkeyp-82a1.1"
                     /product="si:dkeyp-82a1.1, transcript variant X3"
                     /experiment="COORDINATES: cap analysis [ECO:0007248] and
                     polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:101886381"
                     /db_xref="ZFIN:ZDB-GENE-081105-23"
ORIGIN      
        1 ggatcatgga tgcgctaatg gacgacacgg atgacaagga aagtgccatc gtacatcctc
       61 tgggtgtctt gaggagctgg tctttggata atgctgagca ggtctttctt tctggtaaag
      121 attattatta cagtgaagta aaagaattta acagacagat ttacaaacaa ctgacgaaag
      181 aagggagacc attcaatagt ccctttattt atcaggggtt gccacagcag aaggaactgc
      241 caacttatcc agcatatgtt ttacacagcg gatgcccttc cagctgcaac ccagtactgg
      301 gaaacaccca tttacactca tacacttgaa catggggaga acatgcaaac tccacacaga
      361 aatgaccact ggcccagccg gggcttgaac cagcaacctt cttgctgtga agcgacggtg
      421 ctaaccactg tgctgcccta tgtgctctat gcgggtgagt gggattgaca aaccacttgg
      481 agggaacact cttgctgtct taaccagaca ttttgttata aataatcatg tgcgtttcat
      541 gtttattcat ataactgcta ttttatctct tagcacttca tttttgtctt gatatttaat
      601 atctcttgtt taaatacact atgaacagca gctgcgctaa ttattttcct tgttccctat
      661 ttccacctgg ggatattcat ccagaggcct ctagagatcg taacctgtga agagatgatg
      721 ccaccataga ggacttctaa atgtatccat aatcctgaaa cagaccgtat catgagcaga
      781 tgctgtggtg gtcatggaga agtggagagc atgagactga ttaatgaaag accccagtga
      841 cagatgagtg cccacattga ccctgtggtc cagcctgaaa accagctggt gacctactca
      901 cacctgcagc ttctctatga tggacgccca gtgtttgcct ccagcgccta gactgcagct
      961 ctgcatgtga agtgtggcca gaagagaaat ggttgttccc aactgagcct agtttctctc
     1021 aaggtttatt ccttcccttt catcaattgg agctaaagtc tacagccagt ctgaatgcag
     1081 caactgaata aacagtgggg tcaattttgt ggttgaattg cattaataaa aaaaaagtgt
     1141 ggatatttat ataaatgtac attcttgaat c
//
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