U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm4724 predicted gene 4724 [ Mus musculus (house mouse) ]

Gene ID: 100043915, updated on 27-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
Gm4724provided by MGI
Official Full Name
predicted gene 4724provided by MGI
Primary source
MGI:MGI:3782904
See related
Ensembl:ENSMUSG00000078897 AllianceGenome:MGI:3782904
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to several human genes including ZNF20 (zinc finger protein 20). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in bladder adult (RPKM 7.6), cerebellum adult (RPKM 7.6) and 24 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm4724 in Genome Data Viewer
Location:
2 H4; 2 98.42 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (175254562..175397990, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (175418037..175704126, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr2:175197770-175198071 Neighboring gene zinc finger protein 968 Neighboring gene predicted gene, 57830 Neighboring gene STARR-positive B cell enhancer mm9_chr2:175295270-175295570 Neighboring gene zinc finger protein 965 Neighboring gene predicted gene 11007 Neighboring gene STARR-positive B cell enhancer mm9_chr2:175702723-175703023 Neighboring gene zinc finger protein 969

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC100043915

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001256480.1 → NP_001243409.1  uncharacterized protein LOC100043915

    See identical proteins and their annotated locations for NP_001243409.1

    Status: VALIDATED

    Source sequence(s)
    CT573378
    Consensus CDS
    CCDS57193.1
    UniProtKB/TrEMBL
    A2ART4
    Related
    ENSMUSP00000104673.3, ENSMUST00000109045.9
    Conserved Domains (3) summary
    COG5048
    Location:74 → 486
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:217 → 237
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:3 → 44
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    175254562..175397990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036156774.1 → XP_036012667.1  uncharacterized protein LOC100043915 isoform X1

    Conserved Domains (3) summary
    COG5048
    Location:93 → 505
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:236 → 256
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:22 → 63
    KRAB; KRAB box

  2. XM_017314489.3 → XP_017169978.1  uncharacterized protein LOC100043915 isoform X1

    Conserved Domains (3) summary
    COG5048
    Location:93 → 505
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:236 → 256
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:22 → 63
    KRAB; KRAB box

  3. XM_030246016.2 → XP_030101876.1  uncharacterized protein LOC100043915 isoform X3

    UniProtKB/TrEMBL
    A2ART4
    Conserved Domains (3) summary
    COG5048
    Location:74 → 486
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:217 → 237
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:3 → 44
    KRAB; KRAB box

  4. XM_036156790.1 → XP_036012683.1  uncharacterized protein LOC100043915 isoform X6

    Conserved Domains (2) summary
    COG5048
    Location:42 → 454
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_030246021.2 → XP_030101881.1  uncharacterized protein LOC100043915 isoform X6

    Conserved Domains (2) summary
    COG5048
    Location:42 → 454
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_036156808.1 → XP_036012701.1  uncharacterized protein LOC100043915 isoform X5

    Conserved Domains (2) summary
    COG5048
    Location:42 → 454
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. XM_030246019.2 → XP_030101879.1  uncharacterized protein LOC100043915 isoform X5

    Conserved Domains (2) summary
    COG5048
    Location:42 → 454
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_030246017.2 → XP_030101877.1  uncharacterized protein LOC100043915 isoform X3

    UniProtKB/TrEMBL
    A2ART4
    Conserved Domains (3) summary
    COG5048
    Location:74 → 486
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:217 → 237
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:3 → 44
    KRAB; KRAB box

  9. XM_036156776.1 → XP_036012669.1  uncharacterized protein LOC100043915 isoform X3

    UniProtKB/TrEMBL
    A2ART4
    Conserved Domains (3) summary
    COG5048
    Location:74 → 486
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:217 → 237
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:3 → 44
    KRAB; KRAB box
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.