GEO DataSets

(Submitter supplied) RNA extracted from representative isolates of each serovar grown to late exponential phase in Luria-Bertani broth showed that transcript abundances of core genes were significantly higher (p < 0.05) than those of accessory genes for all three serovars. Inter-serovar comparisons demonstrated higher transcript abundances for genes related to vitamin B12 biosynthesis, and ethanolamine and 1,2-propanediol utilization in S. more...

Organism:

Salmonella enterica subsp. enterica serovar Javiana; Salmonella enterica subsp. enterica serovar Cerro; Salmonella enterica subsp. enterica serovar Typhimurium

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL21220 GPL28563 GPL28564

9 Samples

Download data: TXT

(Submitter supplied) Single-molecule read technologies allow for detection of epigenomic base modifications during routine sequencing by analysis of kinetic data during the reaction, including the duration between base incorporations at the elongation site (the "inter-pulse duration.") Methylome data associated with a closed de novo bacterial genome of Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 was produced and submitted to the Gene Expression Omnibus.

Organism:

Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992

Type:

Methylation profiling by high throughput sequencing

Platform:

GPL16793

1 Sample

Download data: CSV, GFF