txid331111[Organism] - GEO DataSets - NCBI

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Select item 2000404271.

Identification of entertoxigenic Escherichia coli genes transcriptionally altered with the interaction of host cells

(Submitter supplied) Genes identified in ETEC E24377A after interaction with host cells (Caco-2) after time points of 30 min, 60 min and 120 min. Both the adherent and non-adherent cells were profiled as well as E24377a grown only in tissue culture media.

Organism:: Escherichia coli; Shigella; Escherichia coli O139:H28 str. E24377A

Type:: Expression profiling by array

Platform:: GPL13175
21 Samples

Download data: CEL, CHP

Series

Accession:: GSE40427

ID:: 200040427

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000318062.

E. coli strain E24377A

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Escherichia coli; Shigella; Escherichia coli O139:H28 str. E24377A

Type:: Expression profiling by array; Expression profiling by high throughput sequencing

Platforms:: GPL13175 GPL15037
25 Samples

Download data: CEL, TXT

Series

Accession:: GSE31806

ID:: 200031806

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000318053.

Global transcriptomics of enterotoxigenic E. coli strain E24377A

(Submitter supplied) ETEC is an important human pathogen. Although the mechanism of diarrhea is known in ETEC, the regulatory networks are less understood. This study was conducted to understand the global expression of ETEC isolate E24377A under different growth and environmental conditions.

Organism:: Escherichia coli O139:H28 str. E24377A

Type:: Expression profiling by high throughput sequencing

Platform:: GPL15037
2 Samples

Download data: TXT

Series

Accession:: GSE31805

ID:: 200031805

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000318044.

Expression data of enterotoxigenic (ETEC) isolate E24377A

(Submitter supplied) ETEC is an important human pathogen. Although the mechanism of diarrhea is known in ETEC, the regulatory networks are less understood. This study was conducted to understand the global expression of ETEC isolate E24377A under different growth and environemental conditions. ETEC isolate E24377A was grown in the presence of several chemical signals, including bile salts, glucose, and pre-conditioned media (PCM) from other enteric pathogens. more...

Organism:: Shigella; Escherichia coli O139:H28 str. E24377A; Escherichia coli

Type:: Expression profiling by array

Platform:: GPL13175
23 Samples

Download data: CEL

Series

Accession:: GSE31804

ID:: 200031804

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000150375.

Illumina Genome Analyzer II (Escherichia coli E24377A)

Organism:: Escherichia coli O139:H28 str. E24377A

2 Series
2 Samples

Platform

Accession:: GPL15037

ID:: 100015037

Select item 3009938246.

E24377A_NonAdh_120m_2

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from non-adherent E. coli, 120 min

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993824

ID:: 300993824

Select item 3009938237.

E24377A_NonAdh_120m_1

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from non-adherent E. coli, 120 min

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993823

ID:: 300993823

Select item 3009938228.

E24377A_NonAdh_60m_2

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from non-adherent E. coli, 60 min

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993822

ID:: 300993822

Select item 3009938219.

E24377A_NonAdh_60m_1

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from non-adherent E. coli, 60 min

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993821

ID:: 300993821

Select item 30099382010.

E24377A_NonAdh_30m_2

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from non-adherent E. coli, 30 min

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993820

ID:: 300993820

Select item 30099381911.

E24377A_NonAdh_30m_1

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from non-adherent E. coli, 30 min

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993819

ID:: 300993819

Select item 30099381812.

E24377A_broth_120m_3

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 120 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993818

ID:: 300993818

Select item 30099381713.

E24377A_broth_120m_2

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 120 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993817

ID:: 300993817

Select item 30099381614.

E24377A_broth_120m_1

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 120 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993816

ID:: 300993816

Select item 30099381515.

E24377A_broth_60m_3

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 60 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993815

ID:: 300993815

Select item 30099381416.

E24377A_broth_60m_2

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 60 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993814

ID:: 300993814

Select item 30099381317.

E24377A_broth_60m_1

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 60 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993813

ID:: 300993813

Select item 30099381218.

E24377A_broth_30m_3

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 30 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993812

ID:: 300993812

Select item 30099381119.

E24377A_broth_30m_2

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 30 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993811

ID:: 300993811

Select item 30099381020.

E24377A_broth_30m_1

Organism:: Escherichia coli O139:H28 str. E24377A

Source name:: total RNA from planktonic grown bacteria, 30 min after dilution

Platform:: GPL13175
Series:: GSE40427

Download data: CEL, CHP

Sample

Accession:: GSM993810

ID:: 300993810

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