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Links from GEO DataSets

Items: 19

1.

A cellular anatomy of the normal adult human prostate and prostatic urethra

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
32 Samples
Download data
Series
Accession:
GSE120716
ID:
200120716
2.

Single Cell RNA-sequencing of cell types isolated by FACS from normal human prostates

(Submitter supplied) Single-cell RNA-sequencing was conducted on specific cell types and heterogeneous viable cells (sorted by FACS) in order to determine a cellular atlas of the normal human prostate.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
16 Samples
Download data: MTX, TSV
Series
Accession:
GSE117403
ID:
200117403
3.

Bulk RNA-sequencing of cell types isolated by FACS from normal human prostates

(Submitter supplied) Differential expression of prostatic cell types were determined using RNA-sequencing of FACS sorted cell types from normal human prostates. The cell types sequenced were basal epithelia, luminal epithelia, a heterogeneous fibromuscular stroma and a poorly understood "other" epithelial population.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
16 Samples
Download data: TXT
Series
Accession:
GSE117271
ID:
200117271
4.

Single-cell RNA-sequencing of adult mouse lower urinary tracts

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
6 Samples
Download data: H5
Series
Accession:
GSE145929
ID:
200145929
5.

Single-cell RNA-sequencing of adult human prostates and urethra (normal and diseased)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
9 Samples
Download data: H5
Series
Accession:
GSE145928
ID:
200145928
6.

Single-cell RNA-sequencing of adult mouse urethra

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse urethra on the 10x Genomics platform.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
2 Samples
Download data: H5
Series
Accession:
GSE145865
ID:
200145865
7.

Single-cell RNA-sequencing of adult mouse prostates

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse prostates on the 10x Genomics platform.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
4 Samples
Download data: H5
Series
Accession:
GSE145861
ID:
200145861
8.

Single-cell RNA-sequencing of adult human prostates from organ donors

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous human prostates FACS sorted for viability from organ donors (with no known prostatic diseases) on the 10x Genomics platform.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
6 Samples
Download data: H5
Series
Accession:
GSE145843
ID:
200145843
9.

Single-cell RNA-sequencing of adult human prostates from BPH patients

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous human prostates FACS sorted for viability from BPH patients on the 10x Genomics platform.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
3 Samples
Download data: H5
Series
Accession:
GSE145838
ID:
200145838
10.

Single-cell RNA-sequencing of adult mouse lower urinary tracts v2

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL19057 GPL24247
7 Samples
Download data: H5
Series
Accession:
GSE173096
ID:
200173096
11.

Single-cell RNA-sequencing of adult mouse urethra v2

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse urethra on the 10x Genomics platform.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL24247 GPL19057
3 Samples
Download data: H5
Series
Accession:
GSE172515
ID:
200172515
12.

Single-cell RNA-sequencing of adult human normal and BPH (glandular and stroma) prostates and urethra

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18573 GPL24676
19 Samples
Download data: H5
Series
Accession:
GSE172357
ID:
200172357
13.

Single-cell RNA-sequencing of adult mouse prostates v2

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous mouse prostates on the 10x Genomics platform.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
4 Samples
Download data: H5
Series
Accession:
GSE172352
ID:
200172352
14.

Bulk RNA-sequencing of fibroblasts isolated by FACS from normal human prostate

(Submitter supplied) Differential expression of prostatic fibroblasts were determined using RNA-sequencing of FACS sorted fibroblasts from normal human prostate transition and peripheral.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24676
9 Samples
Download data: TXT
Series
Accession:
GSE172347
ID:
200172347
15.

Single-cell RNA-sequencing of adult human prostates from organ donors v2

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous human prostates FACS sorted for viability from organ donors (with no known prostatic diseases) on the 10x Genomics platform.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
6 Samples
Download data: H5
Series
Accession:
GSE172316
ID:
200172316
16.

Single-cell RNA-sequencing of adult human prostates from BPH patients (glandular and stromal phenothpes)

(Submitter supplied) Single-cell RNA-sequencing was conducted on heterogeneous human prostates from BPH patients on the 10x Genomics platform.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18573 GPL24676
13 Samples
Download data: H5
Series
Accession:
GSE172301
ID:
200172301
17.

Molecular pathogenesis of human prostate basal cell hyperplasia reveals a keratinocyte metaplasia

(Submitter supplied) The incidence of basal cell hyperplasia (BCH) has been reported at 8-10%, but a molecular and cellular characterization has not been performed on this phenotype. Using freshly digested tissue from surgical specimens, we performed transcriptomic analysis of flow cytometry-purified basal epithelia from patients with and without a majority BCH phenotype. Gene set enrichment analysis revealed an increased expression of members of the epidermal differentiation complex, resembling the progression of other metaplastic diseases.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18460
7 Samples
Download data: TXT
Series
Accession:
GSE99824
ID:
200099824
18.

Isolation and Functional Interrogation of Adult Human Prostate Epithelial Stem Cells at Single Cell Resolution

(Submitter supplied) Using primary cultures of normal human prostate epithelial cells, we developed a novel prostasphere-based, label-retention assay that permits identification and isolation of stem cells at a single cell level. Their bona fide stem cell nature was confirmed using in vitro and in vivo regenerative assays and documentation of symmetric/asymmetric division. Robust WNT10B and KRT13 expression without E-cadherin or KRT14 staining distinguished individual stem cells from daughter progenitors in spheroids. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18573
6 Samples
Download data: TXT
Series
Accession:
GSE95542
ID:
200095542
19.

Single-cell transcriptomic map of the human and mouse bladders

(Submitter supplied) A comprehensive cellular anatomy of normal human bladder is vital to address the cellular origins of benign bladder disease and bladder cancer. The physiological function and pathological changes of bladder are associated with its cell type. To investigate the classification and underlying function of bladder cells, we conducted single-cell RNA sequencing (scRNA seq) of 12,423 cells from human bladder and 12,884 cells from mouse bladder. more...
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL21273 GPL20795
5 Samples
Download data: MTX, TSV
Series
Accession:
GSE129845
ID:
200129845
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