GEO DataSets

(Submitter supplied) Genes identified in ETEC E24377A after interaction with host cells (Caco-2) after time points of 30 min, 60 min and 120 min. Both the adherent and non-adherent cells were profiled as well as E24377a grown only in tissue culture media.

Organism:

Escherichia coli; Shigella; Escherichia coli O139:H28 str. E24377A

Type:

Expression profiling by array

Platform:

GPL13175

21 Samples

Download data: CEL, CHP

(Submitter supplied) Enterotoxigenic Escherichia coli (ETEC) is a globally prevalent cause of diarrhea. We report the first gene expression analysis of the human host response to experimental challenge with ETEC.

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL571

72 Samples

Download data: CEL

(Submitter supplied) The purpose of our study was to examine the effect of enterotoxigenic E. coli (ETEC) heat-stable toxin (ST) on global T84 gene expression at selected time points following intoxication, with the goal of understanding the functional effects of ST on host epithelium. RNASeq analysis relvealed that ST alters inflammatory gene expression, including the IL-1 family member IL33, which is induced downstream of cGMP.

Organism:

Homo sapiens

Type:

Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing

Platform:

GPL21697

12 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Escherichia coli; Shigella; Escherichia coli O139:H28 str. E24377A

Type:

Expression profiling by array; Expression profiling by high throughput sequencing

Platforms:

GPL13175 GPL15037

25 Samples

Download data: CEL, TXT

(Submitter supplied) ETEC is an important human pathogen. Although the mechanism of diarrhea is known in ETEC, the regulatory networks are less understood. This study was conducted to understand the global expression of ETEC isolate E24377A under different growth and environmental conditions.

Organism:

Escherichia coli O139:H28 str. E24377A

Type:

Expression profiling by high throughput sequencing

Platform:

GPL15037

2 Samples

Download data: TXT

(Submitter supplied) ETEC is an important human pathogen. Although the mechanism of diarrhea is known in ETEC, the regulatory networks are less understood. This study was conducted to understand the global expression of ETEC isolate E24377A under different growth and environemental conditions. ETEC isolate E24377A was grown in the presence of several chemical signals, including bile salts, glucose, and pre-conditioned media (PCM) from other enteric pathogens. more...

Organism:

Shigella; Escherichia coli O139:H28 str. E24377A; Escherichia coli

Type:

Expression profiling by array

Platform:

GPL13175

23 Samples

Download data: CEL

(Submitter supplied) Micro algae's are used as alternative protein source in human and animal diets. Besides micro algae contain substantial amounts of proteins they also contain a high concentration of, often unique, biological and chemical substances with potential to induce beneficial and health promoting effects in humans and animals. This study was set up to evaluate the potential of these substances to improve (intestinal) health. more...

Organism:

Sus scrofa

Type:

Expression profiling by array

Platform:

GPL22998

36 Samples

Download data: TXT