GEO DataSets

(Submitter supplied) Four stable and robust TCE-dechlorinating microbial communities were enriched from TCE-contaminated groundwater under four different conditions exploring two parameters, high and low methanogenic activity (Meth and NoMeth), with and without vitamin B12 supplement (MethB12 and NoMethB12, Meth and NoMeth, respectively). Identical amounts of lactate (2.7 mmol) and TCE (20 μl) were supplied as electron donor and electron acceptor. more...

Organism:

Dehalococcoides mccartyi 195; environmental samples; environmental samples; Dehalococcoides mccartyi BAV1; Dehalococcoides mccartyi CBDB1; Dehalococcoides mccartyi VS; environmental samples

Type:

Genome variation profiling by array

Platform:

GPL10838

12 Samples

Download data: CEL

(Submitter supplied) The aim of this study is to obtain a systems level understanding of the interactions between Dehalococcoides and corrinoid-supplying microorganisms by analyzing community structures and functional compositions, activities and dynamics in trichloroethene (TCE)-dechlorinating enrichments. Metagenomes and metatranscriptomes of the dechlorinating enrichments with and without exogenous cobalamin were compared. more...

Organism:

Dehalococcoides mccartyi 195; Dehalococcoides mccartyi; Dehalococcoides mccartyi BAV1; Dehalococcoides mccartyi VS; Dehalococcoides mccartyi CBDB1

Type:

Expression profiling by array

Platform:

GPL10838

12 Samples

Download data: CEL

(Submitter supplied) Microbial reductive dechlorination of trichloroethene (TCE) in groundwater often results in the accumulation of dichloroethenes (DCEs). Dehalococcoides mccartyi (Dhc) are the only known bacteria capable of dechlorination beyond DCE to non-toxic ethene. In this study, two newly isolated Dhc strains (11a and 11a5) with dissimilar functional abilities are described. Strain 11a reductively dechlorinates TCE, 1,1-DCE, cis-DCE, trans-DCE, and vinyl chloride (VC) to ethene, while strain 11a5 dechlorinates TCE and all three DCE isomers only to VC. more...

Organism:

Dehalococcoides; Dehalococcoides mccartyi 195; Dehalococcoides mccartyi VS; Dehalococcoides mccartyi BAV1; Dehalococcoides mccartyi CBDB1

Type:

Genome variation profiling by array

Platform:

GPL10838

6 Samples

Download data: CEL, CHP

(Submitter supplied) Differental gene expression of three consortia: Dhc195/DVH with exogenous cobalamin, Dhc195/DVH/PF with exogenous cobalamin, Dhc195/DVH/PF without exogenous cobalamin Acronyms: Dhc195: Dehalococcoides mccartyi strain 195; DVH: Desulfovibrio vulgaris Hildenborough; PF: Pelosinus fermentans strain R7

Organism:

Nitratidesulfovibrio vulgaris str. Hildenborough; Dehalococcoides mccartyi CBDB1; Pelosinus fermentans DSM 17108; Dehalococcoides mccartyi VS; Dehalococcoides mccartyi BAV1; Dehalococcoides mccartyi 195

Type:

Expression profiling by array

Platform:

GPL10838

9 Samples

Download data: CEL