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Items: 4

1.

High-throughput capture of transcription factor-driven chromatin dynamics using PHILO ChIP-seq

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Cannabis sativa; Arabidopsis thaliana; Solanum lycopersicum
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL21762 GPL19580 GPL34008
229 Samples
Download data: BW, CSV, RESULTS
Series
Accession:
GSE249738
ID:
200249738
2.

High-throughput capture of transcription factor-driven chromatin dynamics using PHILO ChIP-seq (ChIP-seq)

(Submitter supplied) Assessing the dynamics of chromatin and transcription factor (TF) DNA binding in plants remains a significant challenge, primarily due to the lack of efficient tools for capturing these features on a larger scale. Here, we present PHILO (Plant HIgh-throughput LOw input) ChIP-seq, a high-throughput ChIP-seq platform that enables the cost-effective and extensive capture of TF DNA binding and the genome-wide distribution of histone modifications. more...
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL19580
163 Samples
Download data: BED, BW, CSV, NARROWPEAK
Series
Accession:
GSE249736
ID:
200249736
3.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
413 Series
9434 Samples
Download data
Platform
Accession:
GPL19580
ID:
100019580
4.

PHILO, Col-0, H3K9ac, ctrl, rep3

Organism:
Arabidopsis thaliana
Source name:
10-day-old whole seedling
Platform:
GPL19580
Series:
GSE249736 GSE249738
Download data: BW
Sample
Accession:
GSM7962293
ID:
307962293
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Supplemental Content

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