GSM562439[Accession] - GEO DataSets

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Items: 3

Select item 2000226941.

Copy number profiling of gastric cancer cell lines and gastric tumor tissues

(Submitter supplied) Copy number profiling of 27 gastric cancer cell lines and 105 gastric tumor tissues. we hypothesized that a detailed fine-scale survey of genomic CNAs might reveal potential genes disrupted by fusion events in gastric cancer. We inferred the locations of likely chromosomal breakpoints by identifying regions where closely-spaced microarray probes exhibited striking transitions in copy number.

Organism:: Homo sapiens

Type:: Genome variation profiling by genome tiling array

Platform:: GPL4544
132 Samples

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Accession:: GSE22694

ID:: 200022694

Select item 1000045442.

Agilent-014584 Human Genome 244K CGH Microarray (Alpha Test)

(Submitter supplied) Alpha test array -- final design is Agilent-014693, P/N G4411B. Arrays of this design have barcodes that begin with 16014584 or 2514584. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...