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Items: 4

1.

Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Gallus gallus; Sus scrofa; Bos taurus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
9 related Platforms
334 Samples
Download data: BED, TXT
Series
Accession:
GSE158430
ID:
200158430

PubMed Full text in PMC Similar studies

2.

Comparative functional genome annotation of livestock species identifies core amniote regulatory features and avian enhancer versatility (H3K4me1 ChIP-Seq)

(Submitter supplied) Gene regulatory elements are central drivers of phenotypic variation and thus of critical importance towards understanding the genetics of complex traits. Here we present a genome-wide annotation of regulatory elements in a non-mammalian vertebrate, chicken (Gallus gallus), as well as two important agricultural mammalian species: pig (Sus scrofa) and cattle (Bos taurus), with chicken and pig in particular being important to human biology and medicine. more...
Organism:
Bos taurus; Gallus gallus; Sus scrofa
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL23295 GPL22475 GPL23499
48 Samples
Download data: BED
Series
Accession:
GSE158427
ID:
200158427

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina HiSeq 4000 (Gallus gallus)

Organism:
Gallus gallus
63 Series
1703 Samples
Download data
Platform
Accession:
GPL23499
ID:
100023499

4.

H3K4me1 from UC Davis FAANG chicken adipose rep B

Organism:
Gallus gallus
Source name:
Adipose
Platform:
GPL23499
Series:
GSE158427 GSE158430
Download data: BED
Sample
Accession:
GSM4800039
ID:
304800039

SRA Run Selector

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db=gds|term=GSM4800039[Accession]|query=1|qty=4|blobid=MCID_674ab1602b399b623827daef|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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