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Items: 4

1.

Promoter methylome and integrative transcriptome profiling identify key epigenetics-regulated genes in human HCCs

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL11154 GPL9052
32 Samples
Download data: TXT
Series
Accession:
GSE55759
ID:
200055759
2.

Promoter methylome and integrative transcriptome profiling identify key epigenetics-regulated genes in human HCCs [methylation]

(Submitter supplied) Hepatocellular carcinoma (HCC) is one of the most common and lethal cancers worldwide and has a poor prognosis. Promoters represent an essential regulatory element of gene transcription in the human genome. In order to understand the promoter methylation in relation with gene transcription in HCCs, we applied a liquid hybridization capture-based bisulfite sequencing (LHC-BS) approach to examine the promoter methylome of HCCs, for which we customized 150,407 capture probes and enabled coverage of 91.8% of the RefSeq gene promoters within the human genome. more...
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL11154
16 Samples
Download data: TXT
Series
Accession:
GSE55752
ID:
200055752
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

1308388 Tumor [methylation]

Organism:
Homo sapiens
Source name:
liver, HCC tumor
Platform:
GPL11154
Series:
GSE55752 GSE55759
Download data: TXT
Sample
Accession:
GSM1342805
ID:
301342805
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