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Items: 4

1.

Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Drosophila melanogaster
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL13304 GPL9061
14 Samples
Download data: WIG
Series
Accession:
GSE52887
ID:
200052887
2.

Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins [CP190 ChIP-Seq]

(Submitter supplied) Eukaryotic chromosomes are partitioned into topologically associating domains (TADs) that are demarcated by distinct insulator-binding proteins (IBPs) in Drosophila. Whether IBPs regulate specific long-range contacts and how this may impact gene expression remains unclear. Here we identify ‘indirect peaks’ of multiple IBPs, that represent their distant sites of interactions through long-range contacts. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL13304
4 Samples
Download data: WIG
Series
Accession:
GSE52886
ID:
200052886
3.

Illumina HiSeq 2000 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
910 Series
18316 Samples
Download data
Platform
Accession:
GPL13304
ID:
100013304
4.

CP190-WT1

Organism:
Drosophila melanogaster
Source name:
S2 cells
Platform:
GPL13304
Series:
GSE52886 GSE52887
Download data: WIG
Sample
Accession:
GSM1277517
ID:
301277517
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Supplemental Content

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