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1.

TRIBE : Hijacking an RNA-editing enzyme to identify cell-specific targets of RNA-binding proteins

(Submitter supplied) RNA transcripts are bound and regulated by RNA-binding proteins (RBPs). Current methods for identifying in vivo targets of a RBP are imperfect and not amenable to examining small numbers of cells. To address these issues, we developed TRIBE (Targets of RNA-binding proteins Identified By Editing), a technique that couples an RBP to the catalytic domain of the Drosophila RNA editing enzyme ADAR and expresses the fusion protein in vivo. more...
Organism:
Drosophila melanogaster
Type:
Other
Platforms:
GPL13304 GPL19132
41 Samples
Download data: BEDGRAPH
Series
Accession:
GSE78065
ID:
200078065
2.

Illumina NextSeq 500 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
487 Series
11751 Samples
Download data
Platform
Accession:
GPL19132
ID:
100019132
3.

Illumina HiSeq 2000 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
910 Series
18316 Samples
Download data
Platform
Accession:
GPL13304
ID:
100013304
4.

s2_gDNA 41

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data
Sample
Accession:
GSM2065948
ID:
302065948
5.

s2_CLIP_Hrp48 40

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065947
ID:
302065947
6.

s2_CLIP_Hrp48-ADARcd-V5 39

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065946
ID:
302065946
7.

neuron_elav_Hrp48_TRIBE_mRNA 34

Organism:
Drosophila melanogaster
Source name:
neuron
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065941
ID:
302065941
8.

neuron_elav_Hrp48_TRIBE_mRNA 33

Organism:
Drosophila melanogaster
Source name:
neuron
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065940
ID:
302065940
9.

neuron_TH_Hrp48_TRIBE_mRNA 32

Organism:
Drosophila melanogaster
Source name:
neuron
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065939
ID:
302065939
10.

neuron_TH_Hrp48_TRIBE_mRNA 31

Organism:
Drosophila melanogaster
Source name:
neuron
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065938
ID:
302065938
11.

neuron_pdf_Hrp48_TRIBE_mRNA 30

Organism:
Drosophila melanogaster
Source name:
neuron
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065937
ID:
302065937
12.

neuron_pdf_Hrp48_TRIBE_mRNA 29

Organism:
Drosophila melanogaster
Source name:
neuron
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065936
ID:
302065936
13.

s2_Hrp48_mut_TRIBE_mRNA_rep2 28

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065935
ID:
302065935
14.

s2_Hrp48_mut_TRIBE_mRNA_rep1 27

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065934
ID:
302065934
15.

s2_Hrp48_mut_TRIBE_mRNA_rep2 26

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065933
ID:
302065933
16.

s2_Hrp48_mut_TRIBE_mRNA_rep1 25

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065932
ID:
302065932
17.

s2_ADARcat_domain_mRNA_rep2 24

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065931
ID:
302065931
18.

s2_ADARcat_domain_mRNA_rep1 23

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065930
ID:
302065930
19.

s2_ADARcat_domain_mRNA_rep2 22

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065929
ID:
302065929
20.

s2_ADARcat_domain_mRNA_rep1 21

Organism:
Drosophila melanogaster
Source name:
s2 cell
Platform:
GPL13304
Series:
GSE78065
Download data: BEDGRAPH
Sample
Accession:
GSM2065928
ID:
302065928
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Supplemental Content

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