GSE166823[Accession] - GEO DataSets - NCBI

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Gene expression after knockdown of transcription factors in human iPSC-derived cardiac myocytes

(Submitter supplied) We report gene expression changes after knockdown of transcription factors in human iPSC-derived cardiac myocytes. In prior experiments we showed that transcription factors known to be important for cardiac development were frequently up-regulated (i.e., "responsive") after small molecule perturbations of cultured iPSC-derived cardiac myocytes. We used RNA sequencing to test whether siRNA-mediated knockdown of transcription factors with different perturbation-responsiveness and tissue-specificity profiles would lead to inappropriate up-regulation of non-myocyte gene sets in cardiac myocytes.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21697
33 Samples

Download data: TSV

Series

Accession:: GSE166823

ID:: 200166823

Analyze with GEO2R SRA Run Selector

Select item 1000216972.

NextSeq 550 (Homo sapiens)

Organism:: Homo sapiens

1499 Series
44577 Samples

Platform

Accession:: GPL21697

ID:: 100021697

Select item 3050861003.

ZFPM2-5-3-p1-5C

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086100

ID:: 305086100

SRA Run Selector

Select item 3050860994.

ZFPM2-5-2-p1-5B

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086099

ID:: 305086099

SRA Run Selector

Select item 3050860985.

ZFPM2-5-1-p1-5A

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086098

ID:: 305086098

SRA Run Selector

Select item 3050860976.

SOX11-7-3-p2-1C

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086097

ID:: 305086097

SRA Run Selector

Select item 3050860967.

SOX11-7-2-p2-1B

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086096

ID:: 305086096

SRA Run Selector

Select item 3050860958.

SOX11-7-1-p2-1A

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086095

ID:: 305086095

SRA Run Selector

Select item 3050860949.

SKIDA1-9-3-p2-3C

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086094

ID:: 305086094

SRA Run Selector

Select item 30508609310.

SKIDA1-9-2-p2-3B

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086093

ID:: 305086093

SRA Run Selector

Select item 30508609211.

SKIDA1-9-1-p2-3A

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086092

ID:: 305086092

SRA Run Selector

Select item 30508609112.

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086091

ID:: 305086091

SRA Run Selector

Select item 30508609013.

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086090

ID:: 305086090

SRA Run Selector

Select item 30508608914.

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086089

ID:: 305086089

SRA Run Selector

Select item 30508608815.

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086088

ID:: 305086088

SRA Run Selector

Select item 30508608716.

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086087

ID:: 305086087

SRA Run Selector

Select item 30508608617.

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086086

ID:: 305086086

SRA Run Selector

Select item 30508608518.

NKX2-5-1-3-p1-1C

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086085

ID:: 305086085

SRA Run Selector

Select item 30508608419.

NKX2-5-1-2-p1-1B

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086084

ID:: 305086084

SRA Run Selector

Select item 30508608320.

NKX2-5-1-1-p1-1A

Organism:: Homo sapiens

Source name:: iPSC-derived cardiac myocytes

Platform:: GPL21697
Series:: GSE166823

Sample

Accession:: GSM5086083

ID:: 305086083

SRA Run Selector

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