GEO DataSets

(Submitter supplied) We used adipose-derived human stromal/stem cells to reconstruct an adipose tridimensional model. To determine to what extend the in vitro model is representative of its native counterpart, transcriptomes were analysed.

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL6097

18 Samples

Download data: XLSX

(Submitter supplied) Decreased fetal nutrient delivery is a major cause of developmental neuropathology. Although intrauterine growth restriction spares fetal brain weight, we hypothesized that frontal cortices of fetuses of mothers nutrient restricted during pregnancy, would have decreased ribosomal protein expression. This could potentially result in compromised function since these cellular subunits play a central role in protein synthesis and cellular energetics. more...

Organism:

Homo sapiens; Papio hamadryas

Type:

Expression profiling by array

Platform:

GPL6097

12 Samples

Download data: TXT

(Submitter supplied) Consistent and independently replicated laboratory evidence to support a causative relationship between environmental exposure to extremely low frequency electromagnetic fields (ELF-EMF) at power line frequencies and the associated increase in risk of childhood leukaemia has not been obtained. In particular, although gene expression responses have been reported in a wide variety of cells, none have emerged as robust, widely replicated effects. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL6097

48 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Homo sapiens

Type:

Expression profiling by array

Platforms:

GPL6884 GPL6097

12 Samples

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(Submitter supplied) The cellular gene expression profiles were investigated after CT16 (PAGE5) silencing in CT16 positive A2058 melanoma cells. Control siRNA treated A2058 cells was used as a negative control.

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL6097

6 Samples

Download data: TXT

(Submitter supplied) We generated a blood-derived transcriptional signature that discriminates patients with lung cancer from non-affected smokers. When applied to blood samples from one of the largest prospective population-based cancer studies (the European Prospective Investigation into Cancer and Nutrition), this signature accurately predicted the occurrence of lung cancer in smokers within two years before the onset of clinical symptoms. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platforms:

GPL6097 GPL6102

292 Samples

Download data: TXT

(Submitter supplied) Mutations in KDM5C, (previously named SMCX or JARID1C) a gene that encodes a transcriptional regulator with histone-demethylase activity specific for di- and tri-methylated H3K4, are a comparatively frequent cause of non-syndromic X-linked mental retardation (NS-XLMR). Specific transcriptional targets of KDM5C, however, are still unknown and the effects of KDM5C deficiency on gene expression have not yet been investigated. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL6097

4 Samples

Download data: TXT

(Submitter supplied) The development of a comparison approach for Illumina bead chips unravels unexpected challenges applying newest generation microarrays The MAQC project demonstrated that microarrays with comparable content show inter- and intra-platform reproducibility. However, since the content of gene databases still increases, the development of new generations of microarrays covering new content is mandatory. To better understand the potential challenges updated microarray content might pose on clinical and biological projects we developed a methodology consisting of in silico analyses combined with performance analysis using real biological samples. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platforms:

GPL6106 GPL6097

48 Samples

Download data: TXT

(Submitter supplied) The MAQC project demonstrated that microarrays with comparable content show inter- and intra-platform reproducibility. However, since the content of gene databases still increases, the development of new generations of microarrays covering new content is mandatory. To better understand the potential challenges updated microarray content might pose on clinical and biological projects we developed a methodology consisting of in silico analyses combined with performance analysis using real biological samples. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL6097

2 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Homo sapiens

Type:

Expression profiling by array

Platforms:

GPL6097 GPL570

20 Samples

Download data: CEL, TXT

(Submitter supplied) The present study was conducted to compare the ability of Affymetrix and Illumina microarray technologies to characterize the differential gene expression profiles of human monocytes and monocyte-derived-macrophages. Keywords: Cross-platform comparison

Organism:

Homo sapiens

Type:

Expression profiling by array

Dataset:

GDS3555

Platform:

GPL6097

10 Samples

Download data: TXT

Comparison of monocytes and macrophages. Samples obtained from patients with acute coronary syndrome. Results compared to the performance of Affymetrix arrays (GDS3554). The result from two-color arrays (GDS3553) was used as a reference for the Illumina and Affymetrix arrays.

Organism:

Homo sapiens

Type:

Expression profiling by array, transformed count, 2 cell type, 5 individual sets

Platform:

GPL6097

Series:

GSE10213

10 Samples

Download data: TXT

(Submitter supplied) Semaphorins are a large family of evolutionary conserved morphogenetic signals originally identified as repelling cues in axonal guidance. Intriguingly, Semaphorins have recently been implicated to play a role in cancer progression. In particular, Semaphorin 3B (SEMA3B) is considered a putative tumor suppressor, and yet we found that it is expressed at high levels in many invasive and metastatic human cancers. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL6097

4 Samples

Download data: TXT

(Submitter supplied) The Human-6 Expression BeadChip contains six arrays on a single BeadChip, each with >46,000 probes derived from human genes in the National Center for Biotechnology Information (NCBI) Reference Sequence (RefSeq) and UniGene databases. Please use the GEO Data Submission Report Plug-in v1.0 for Gene Expression which may be downloaded from https://icom.illumina.com/icom/software.ilmn?id=234 to format the normalized and raw data. more...

Organism:

Homo sapiens

1 DataSet

12 Series

178 Samples

Download data: CSV