GPL27722[Accession] - GEO DataSets - NCBI

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Items: 20

Select item 2001399391.

Genome-scale transcription–translation mapping reveals novel features of Zymomonas mobilis promoters and transcription units

(Submitter supplied) We collected sample-matched multiomics data including RNA-seq, transcription start site sequencing (TSS-seq), termination sequencing (term-seq), ribosome profiling, and label-free shotgun proteomic mass spectrometry across different growth conditions to improve annotation and assign functional sites in the Zymomonas mobilis subsp. mobilils ZM4 genome. Proteomics and ribosome profiling informed revisions of protein-coding genes, which included 44 start codon changes and 42 added proteins. more...

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Type:: Expression profiling by high throughput sequencing; Other

Platforms:: GPL27722 GPL26046
94 Samples

Download data: BEDGRAPH, TXT

Series

Accession:: GSE139939

ID:: 200139939

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000277222.

NextSeq 550 (Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821)

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

1 Series
18 Samples

Platform

Accession:: GPL27722

ID:: 100027722

Select item 3041502493.

RMG Anaer Stationary Ribo-seq rep3

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150249

ID:: 304150249

SRA Run Selector

Select item 3041502484.

RMG Anaer Stationary Ribo-seq rep2

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150248

ID:: 304150248

SRA Run Selector

Select item 3041502475.

RMG Anaer Stationary Ribo-seq rep1

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150247

ID:: 304150247

SRA Run Selector

Select item 3041502466.

RMG Anaer mid-Glucose Ribo-seq rep3

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150246

ID:: 304150246

SRA Run Selector

Select item 3041502457.

RMG Anaer mid-Glucose Ribo-seq rep2

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150245

ID:: 304150245

SRA Run Selector

Select item 3041502448.

RMG Anaer mid-Glucose Ribo-seq rep1

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150244

ID:: 304150244

SRA Run Selector

Select item 3041502439.

RMG Aero Stationary Ribo-seq rep4

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150243

ID:: 304150243

SRA Run Selector

Select item 30415024210.

RMG Aero Stationary Ribo-seq rep3

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150242

ID:: 304150242

SRA Run Selector

Select item 30415024111.

RMG Aero Stationary Ribo-seq rep2

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150241

ID:: 304150241

SRA Run Selector

Select item 30415024012.

RMG Aero Stationary Ribo-seq rep1

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150240

ID:: 304150240

SRA Run Selector

Select item 30415023913.

RMG Aero mid-Glucose Ribo-seq rep3

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150239

ID:: 304150239

SRA Run Selector

Select item 30415023814.

RMG Aero mid-Glucose Ribo-seq rep2

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150238

ID:: 304150238

SRA Run Selector

Select item 30415023715.

RMG Aero mid-Glucose Ribo-seq rep1

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150237

ID:: 304150237

SRA Run Selector

Select item 30415023616.

MMG Anaer Stationary Ribo-seq rep3

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150236

ID:: 304150236

SRA Run Selector

Select item 30415023517.

MMG Anaer Stationary Ribo-seq rep2

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150235

ID:: 304150235

SRA Run Selector

Select item 30415023418.

MMG Anaer Stationary Ribo-seq rep1

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150234

ID:: 304150234

SRA Run Selector

Select item 30415023319.

MMG Anaer mid-Glucose Ribo-seq rep3

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150233

ID:: 304150233

SRA Run Selector

Select item 30415023220.

MMG Anaer mid-Glucose Ribo-seq rep1

Organism:: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Source name:: cell culture

Platform:: GPL27722
Series:: GSE139939

Download data: BEDGRAPH

Sample

Accession:: GSM4150232

ID:: 304150232

SRA Run Selector

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