GPL22819[Accession] - GEO DataSets

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Select item 2001130931.

Genotypes of case-control samples in major psychosis

(Submitter supplied) We fine-mapped DNA methylation in neuronal nuclei (NeuN+) isolated by flow cytometry from post-mortem frontal cortex of the brain of individuals diagnosed with schizophrenia, bipolar disorder, and controls (n=29, 26, and 28 individuals). These genotype arrays were generated in the same samples to identify genetic-epigenetic interactions.

Organism:: Homo sapiens

Type:: Genome variation profiling by SNP array

Platform:: GPL22819
103 Samples

Download data: IDAT, TXT

Series

Accession:: GSE113093

ID:: 200113093

PubMed Full text in PMC Similar studies

Select item 2001125252.

DNA methylation in neurons from post-mortem brains in schizophrenia and bipolar disorder

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus; Homo sapiens

Type:: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Methylation profiling by array; Genome variation profiling by SNP array

5 related Platforms
332 Samples

Download data: IDAT, TXT

Series

Accession:: GSE112525

ID:: 200112525

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000933533.

In vitro fertilization does not increase the incidence of de novo copy number alterations in fetal and placental lineages

(Submitter supplied) Although chromosomal instability (CIN) is a common phenomenon in cleavage-stage embryogenesis following in vitro fertilization (IVF), its rate in naturally conceived human embryos is unknown. CIN leads to mosaic embryos that contain a combination of genetically normal and abnormal cells, and is significantly higher in in vitro-produced preimplantation embryos as compared to in vivo-conceived preimplantation embryos. more...

Organism:: Homo sapiens

Type:: SNP genotyping by SNP array; Genome variation profiling by SNP array

Platforms:: GPL22819 GPL26750
460 Samples

Download data: IDAT, TXT

Series

Accession:: GSE93353

ID:: 200093353

PubMed Similar studies

Select item 2000969094.

Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Genome variation profiling by SNP array; Genome variation profiling by genome tiling array

15 related Platforms
30 Samples

Download data: CEL, IDAT, TXT

Series

Accession:: GSE96909

ID:: 200096909

PubMed Full text in PMC Similar studies

Select item 2000967895.

Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans [IlluminaPsychArray]

(Submitter supplied) Background High-resolution microarray technology is routinely used in basic research and clinical practice to efficiently detect copy number variants (CNVs) across the entire human genome. A new generation of arrays combining high probe densities with optimized designs will comprise essential tools for genome analysis in the coming years. We systematically compared the genome-wide CNV detection power of all 17 available array designs from the Affymetrix, Agilent, and Illumina platforms by hybridizing the well-characterized genome of 1000 Genomes Project subject NA12878 to all arrays, and performing data analysis using both manufacturer-recommended and platform-independent software. more...