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dbVar

Database of genomic structural variation

nsv976846

Organism: Homo sapiens

Study:nstd82 (Sudmant et al. 2013)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:8,515

Publication(s):Sudmant et al. 2013

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 315 SVs from 63 studies. See in: genome view

Remapped(Score: Perfect):79,640,278-79,648,792

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv976846	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000014.9	Chr14	79,640,278	79,648,792
nsv976846	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000014.8	Chr14	80,106,621	80,115,135
nsv976846	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000014.7	Chr14	79,176,374	79,184,888

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv2757694	deletion	HGDP00521	Sequencing	Read depth	1	17,171
nssv2766573	deletion	HGDP00665	Sequencing	Read depth	0	17,185

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv2757694	Remapped	Perfect	NC_000014.9:g.(?_7 9640278)_(79648792 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	79,640,278	79,648,792
nssv2766573	Remapped	Perfect	NC_000014.9:g.(?_7 9640278)_(79648792 _?)del	GRCh38.p12	First Pass	NC_000014.9	Chr14	79,640,278	79,648,792
nssv2757694	Remapped	Perfect	NC_000014.8:g.(?_8 0106621)_(80115135 _?)del	GRCh37.p13	First Pass	NC_000014.8	Chr14	80,106,621	80,115,135
nssv2766573	Remapped	Perfect	NC_000014.8:g.(?_8 0106621)_(80115135 _?)del	GRCh37.p13	First Pass	NC_000014.8	Chr14	80,106,621	80,115,135
nssv2757694	Submitted genomic		NC_000014.7:g.(?_7 9176374)_(79184888 _?)del	NCBI36 (hg18)		NC_000014.7	Chr14	79,176,374	79,184,888
nssv2766573	Submitted genomic		NC_000014.7:g.(?_7 9176374)_(79184888 _?)del	NCBI36 (hg18)		NC_000014.7	Chr14	79,176,374	79,184,888

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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