nstd82 (Sudmant et al. 2013)
- Organism:
- Bornean orangutan, Chimpanzee, Eastern gorilla, Human, Pygmy chimpanzee, Sumatran orangutan, Western gorilla
- Study Type:
- Control Set
- Submitter:
- Peter Sudmant
- Submitter URL:
- http://eichlerlab.gs.washington.edu/greatape-cnv/
- Description:
- We assessed diversity and evolution of duplication and deletion diversity in the great ape lineage from 97 sequenced high-coverage great ape genomes. See Variant Summary counts for nstd82 in dbVar Variant Summary.
- Project:
- PRJNA189439
- Publication(s):
- Sudmant et al. 2013
- Variants in this study
- Open Bornean orangutan in Taxonomy Browser
- Open Chimpanzee in Taxonomy Browser
- Open Eastern gorilla in Taxonomy Browser
- Open Human in Taxonomy Browser
- Open Pygmy chimpanzee in Taxonomy Browser
- Open Sumatran orangutan in Taxonomy Browser
- Open Western gorilla in Taxonomy Browser
- BioProjects
Source: NCBI
Detailed Information: Download 28214 Variant Regions, Download 1329329 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Submitted: gorGor3.1 (gorGor3)
Remapped: GRCh38.p12 (hg38)
Remapped: GRCh37.p13 (hg19)
Submitted: NCBI36 (hg18)
Submitted: P_pygmaeus_2.0.2 (ponAbe2)
Submitted: Pan_troglodytes-2.1.3 (panTro3)
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_018424.1 | Chr1 | 1 | 28 | Submitted | NC_018424.1 |
| NC_018425.1 | Chr2A | 1 | 28 | Submitted | NC_018425.1 |
| NC_018429.1 | Chr5 | 1 | 28 | Submitted | NC_018429.1 |
| NC_018433.1 | Chr9 | 1 | 11 | Submitted | NC_018433.1 |
| NC_018435.1 | Chr11 | 1 | 28 | Submitted | NC_018435.1 |
| NC_018439.1 | Chr15 | 1 | 28 | Submitted | NC_018439.1 |
| NC_018443.1 | Chr19 | 1 | 28 | Submitted | NC_018443.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.11 | Chr1 | 2,169 | 116,384 | Remapped | NC_000001.11 |
| NC_000002.12 | Chr2 | 1,906 | 87,239 | Remapped | NC_000002.12 |
| NC_000003.12 | Chr3 | 1,122 | 44,917 | Remapped | NC_000003.12 |
| NC_000004.12 | Chr4 | 1,284 | 46,513 | Remapped | NC_000004.12 |
| NC_000005.10 | Chr5 | 1,479 | 61,733 | Remapped | NC_000005.10 |
| NC_000006.12 | Chr6 | 1,110 | 49,062 | Remapped | NC_000006.12 |
| NC_000007.14 | Chr7 | 1,523 | 75,750 | Remapped | NC_000007.14 |
| NC_000008.11 | Chr8 | 902 | 37,344 | Remapped | NC_000008.11 |
| NC_000009.12 | Chr9 | 1,805 | 78,278 | Remapped | NC_000009.12 |
| NC_000010.11 | Chr10 | 1,186 | 55,460 | Remapped | NC_000010.11 |
| NC_000011.10 | Chr11 | 1,041 | 45,840 | Remapped | NC_000011.10 |
| NC_000012.12 | Chr12 | 906 | 44,214 | Remapped | NC_000012.12 |
| NC_000013.11 | Chr13 | 805 | 30,969 | Remapped | NC_000013.11 |
| NC_000014.9 | Chr14 | 729 | 33,256 | Remapped | NC_000014.9 |
| NC_000015.10 | Chr15 | 803 | 43,078 | Remapped | NC_000015.10 |
| NC_000016.10 | Chr16 | 1,063 | 58,202 | Remapped | NC_000016.10 |
| NC_000017.11 | Chr17 | 806 | 47,007 | Remapped | NC_000017.11 |
| NC_000018.10 | Chr18 | 521 | 22,716 | Remapped | NC_000018.10 |
| NC_000019.10 | Chr19 | 570 | 37,589 | Remapped | NC_000019.10 |
| NC_000020.11 | Chr20 | 340 | 17,813 | Remapped | NC_000020.11 |
| NC_000021.9 | Chr21 | 306 | 12,750 | Remapped | NC_000021.9 |
| NC_000022.11 | Chr22 | 549 | 32,310 | Remapped | NC_000022.11 |
| NT_167213.1 | Unplaced|NT_167213.1 | 1 | 8 | Remapped | NT_167213.1 |
| NT_187502.1 | Unplaced|NT_187502.1 | 1 | 12 | Remapped | NT_187502.1 |
| NT_187513.1 | Unplaced|NT_187513.1 | 28 | 1,163 | Remapped | NT_187513.1 |
| NT_187361.1 | Chr1|NT_187361.1 | 31 | 1,577 | Remapped | NT_187361.1 |
| NT_187364.1 | Chr1|NT_187364.1 | 3 | 178 | Remapped | NT_187364.1 |
| NT_187514.1 | Chr1|NT_187514.1 | 1 | 97 | Remapped | NT_187514.1 |
| NT_187517.1 | Chr1|NT_187517.1 | 2 | 194 | Remapped | NT_187517.1 |
| NT_187518.1 | Chr1|NT_187518.1 | 10 | 552 | Remapped | NT_187518.1 |
| NT_187519.1 | Chr1|NT_187519.1 | 27 | 679 | Remapped | NT_187519.1 |
| NT_187520.1 | Chr1|NT_187520.1 | 14 | 711 | Remapped | NT_187520.1 |
| NT_187646.1 | Chr1|NT_187646.1 | 10 | 552 | Remapped | NT_187646.1 |
| NW_003315906.1 | Chr1|NW_003315906.1 | 2 | 105 | Remapped | NW_003315906.1 |
| NW_009646195.1 | Chr1|NW_009646195.1 | 1 | 97 | Remapped | NW_009646195.1 |
| NW_009646196.1 | Chr1|NW_009646196.1 | 1 | 97 | Remapped | NW_009646196.1 |
| NW_011332687.1 | Chr1|NW_011332687.1 | 1 | 97 | Remapped | NW_011332687.1 |
| NW_011332688.1 | Chr1|NW_011332688.1 | 1 | 97 | Remapped | NW_011332688.1 |
| NW_012132914.1 | Chr1|NW_012132914.1 | 4 | 354 | Remapped | NW_012132914.1 |
| NW_014040925.1 | Chr1|NW_014040925.1 | 2 | 49 | Remapped | NW_014040925.1 |
| NW_014040926.1 | Chr1|NW_014040926.1 | 2 | 98 | Remapped | NW_014040926.1 |
| NW_014040927.1 | Chr1|NW_014040927.1 | 3 | 100 | Remapped | NW_014040927.1 |
| NW_015495298.1 | Chr1|NW_015495298.1 | 1 | 80 | Remapped | NW_015495298.1 |
| NW_017852928.1 | Chr1|NW_017852928.1 | 12 | 690 | Remapped | NW_017852928.1 |
| NW_018654706.1 | Chr1|NW_018654706.1 | 2 | 194 | Remapped | NW_018654706.1 |
| NW_018654707.1 | Chr1|NW_018654707.1 | 3 | 106 | Remapped | NW_018654707.1 |
| NW_018654708.1 | Chr1|NW_018654708.1 | 4 | 295 | Remapped | NW_018654708.1 |
| NT_187523.1 | Chr2|NT_187523.1 | 7 | 402 | Remapped | NT_187523.1 |
| NT_187524.1 | Chr2|NT_187524.1 | 4 | 179 | Remapped | NT_187524.1 |
| NT_187526.1 | Chr2|NT_187526.1 | 1 | 18 | Remapped | NT_187526.1 |
| NT_187527.1 | Chr2|NT_187527.1 | 5 | 157 | Remapped | NT_187527.1 |
| NT_187528.1 | Chr2|NT_187528.1 | 7 | 354 | Remapped | NT_187528.1 |
| NT_187529.1 | Chr2|NT_187529.1 | 2 | 18 | Remapped | NT_187529.1 |
| NT_187530.1 | Chr2|NT_187530.1 | 1 | 32 | Remapped | NT_187530.1 |
| NT_187647.1 | Chr2|NT_187647.1 | 7 | 402 | Remapped | NT_187647.1 |
| NT_187648.1 | Chr2|NT_187648.1 | 12 | 709 | Remapped | NT_187648.1 |
| NW_003315908.1 | Chr2|NW_003315908.1 | 1 | 97 | Remapped | NW_003315908.1 |
| NW_012132915.1 | Chr2|NW_012132915.1 | 41 | 1,396 | Remapped | NW_012132915.1 |
| NW_015495299.1 | Chr2|NW_015495299.1 | 4 | 388 | Remapped | NW_015495299.1 |
| NW_018654709.1 | Chr2|NW_018654709.1 | 1 | 2 | Remapped | NW_018654709.1 |
| NW_018654710.1 | Chr2|NW_018654710.1 | 2 | 194 | Remapped | NW_018654710.1 |
| NT_187678.1 | Chr3|NT_187678.1 | 9 | 454 | Remapped | NT_187678.1 |
| NT_187688.1 | Chr3|NT_187688.1 | 9 | 454 | Remapped | NT_187688.1 |
| NT_187689.1 | Chr3|NT_187689.1 | 9 | 454 | Remapped | NT_187689.1 |
| NT_187690.1 | Chr3|NT_187690.1 | 9 | 454 | Remapped | NT_187690.1 |
| NT_187691.1 | Chr3|NT_187691.1 | 9 | 454 | Remapped | NT_187691.1 |
| NT_187532.1 | Chr3|NT_187532.1 | 9 | 454 | Remapped | NT_187532.1 |
| NT_187533.1 | Chr3|NT_187533.1 | 1 | 1 | Remapped | NT_187533.1 |
| NT_187535.1 | Chr3|NT_187535.1 | 1 | 1 | Remapped | NT_187535.1 |
| NT_187536.1 | Chr3|NT_187536.1 | 1 | 2 | Remapped | NT_187536.1 |
| NT_187537.1 | Chr3|NT_187537.1 | 5 | 353 | Remapped | NT_187537.1 |
| NT_187539.1 | Chr3|NT_187539.1 | 17 | 807 | Remapped | NT_187539.1 |
| NT_187649.1 | Chr3|NT_187649.1 | 9 | 454 | Remapped | NT_187649.1 |
| NW_003315913.1 | Chr3|NW_003315913.1 | 1 | 17 | Remapped | NW_003315913.1 |
| NW_003871060.2 | Chr3|NW_003871060.2 | 3 | 119 | Remapped | NW_003871060.2 |
| NW_009646197.1 | Chr3|NW_009646197.1 | 8 | 664 | Remapped | NW_009646197.1 |
| NW_012132916.1 | Chr3|NW_012132916.1 | 1 | 97 | Remapped | NW_012132916.1 |
| NW_017363813.1 | Chr3|NW_017363813.1 | 2 | 2 | Remapped | NW_017363813.1 |
| NW_018654711.1 | Chr3|NW_018654711.1 | 1 | 17 | Remapped | NW_018654711.1 |
| NW_019805489.1 | Chr3|NW_019805489.1 | 2 | 4 | Remapped | NW_019805489.1 |
| NW_019805491.1 | Chr3|NW_019805491.1 | 1 | 97 | Remapped | NW_019805491.1 |
| NW_019805492.1 | Chr3|NW_019805492.1 | 1 | 11 | Remapped | NW_019805492.1 |
| NT_187679.1 | Chr4|NT_187679.1 | 3 | 194 | Remapped | NT_187679.1 |
| NT_113793.3 | Chr4|NT_113793.3 | 20 | 1,058 | Remapped | NT_113793.3 |
| NT_167250.2 | Chr4|NT_167250.2 | 12 | 859 | Remapped | NT_167250.2 |
| NT_187540.1 | Chr4|NT_187540.1 | 1 | 1 | Remapped | NT_187540.1 |
| NT_187541.1 | Chr4|NT_187541.1 | 1 | 1 | Remapped | NT_187541.1 |
| NT_187542.1 | Chr4|NT_187542.1 | 1 | 1 | Remapped | NT_187542.1 |
| NT_187545.1 | Chr4|NT_187545.1 | 1 | 97 | Remapped | NT_187545.1 |
| NW_003315914.1 | Chr4|NW_003315914.1 | 1 | 2 | Remapped | NW_003315914.1 |
| NW_003315915.1 | Chr4|NW_003315915.1 | 2 | 5 | Remapped | NW_003315915.1 |
| NW_013171800.1 | Chr4|NW_013171800.1 | 2 | 2 | Remapped | NW_013171800.1 |
| NW_013171801.1 | Chr4|NW_013171801.1 | 2 | 39 | Remapped | NW_013171801.1 |
| NW_017363814.1 | Chr4|NW_017363814.1 | 2 | 18 | Remapped | NW_017363814.1 |
| NT_187546.1 | Chr5|NT_187546.1 | 4 | 40 | Remapped | NT_187546.1 |
| NT_187550.1 | Chr5|NT_187550.1 | 1 | 32 | Remapped | NT_187550.1 |
| NT_187651.1 | Chr5|NT_187651.1 | 42 | 1,364 | Remapped | NT_187651.1 |
| NT_187652.1 | Chr5|NT_187652.1 | 5 | 77 | Remapped | NT_187652.1 |
| NW_003315917.2 | Chr5|NW_003315917.2 | 13 | 228 | Remapped | NW_003315917.2 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 2 | 34 | Remapped | NW_003315920.1 |
| NW_003571036.1 | Chr5|NW_003571036.1 | 4 | 193 | Remapped | NW_003571036.1 |
| NW_009646199.1 | Chr5|NW_009646199.1 | 1 | 54 | Remapped | NW_009646199.1 |
| NW_016107297.1 | Chr5|NW_016107297.1 | 7 | 406 | Remapped | NW_016107297.1 |
| NW_016107298.1 | Chr5|NW_016107298.1 | 6 | 406 | Remapped | NW_016107298.1 |
| NW_018654712.1 | Chr5|NW_018654712.1 | 1 | 1 | Remapped | NW_018654712.1 |
| NT_187692.1 | Chr6|NT_187692.1 | 1 | 37 | Remapped | NT_187692.1 |
| NT_167246.2 | Chr6|NT_167246.2 | 38 | 2,555 | Remapped | NT_167246.2 |
| NT_167247.2 | Chr6|NT_167247.2 | 31 | 1,822 | Remapped | NT_167247.2 |
| NT_167249.2 | Chr6|NT_167249.2 | 40 | 2,242 | Remapped | NT_167249.2 |
| NT_167245.2 | Chr6|NT_167245.2 | 33 | 1,735 | Remapped | NT_167245.2 |
| NT_113891.3 | Chr6|NT_113891.3 | 1 | 97 | Remapped | NT_113891.3 |
| NT_167244.2 | Chr6|NT_167244.2 | 13 | 540 | Remapped | NT_167244.2 |
| NT_187553.1 | Chr6|NT_187553.1 | 1 | 37 | Remapped | NT_187553.1 |
| NT_187554.1 | Chr6|NT_187554.1 | 2 | 18 | Remapped | NT_187554.1 |
| NT_187555.1 | Chr6|NT_187555.1 | 2 | 194 | Remapped | NT_187555.1 |
| NT_187556.1 | Chr6|NT_187556.1 | 3 | 4 | Remapped | NT_187556.1 |
| NW_003315921.1 | Chr6|NW_003315921.1 | 2 | 194 | Remapped | NW_003315921.1 |
| NW_009646200.1 | Chr6|NW_009646200.1 | 2 | 2 | Remapped | NW_009646200.1 |
| NW_012132918.1 | Chr6|NW_012132918.1 | 4 | 209 | Remapped | NW_012132918.1 |
| NW_013171802.1 | Chr6|NW_013171802.1 | 1 | 1 | Remapped | NW_013171802.1 |
| NW_017363815.1 | Chr6|NW_017363815.1 | 1 | 97 | Remapped | NW_017363815.1 |
| NW_018654713.1 | Chr6|NW_018654713.1 | 4 | 100 | Remapped | NW_018654713.1 |
| NT_187558.1 | Chr7|NT_187558.1 | 10 | 313 | Remapped | NT_187558.1 |
| NT_187559.1 | Chr7|NT_187559.1 | 10 | 799 | Remapped | NT_187559.1 |
| NT_187560.1 | Chr7|NT_187560.1 | 2 | 8 | Remapped | NT_187560.1 |
| NT_187561.1 | Chr7|NT_187561.1 | 6 | 422 | Remapped | NT_187561.1 |
| NT_187562.1 | Chr7|NT_187562.1 | 42 | 2,384 | Remapped | NT_187562.1 |
| NT_187564.1 | Chr7|NT_187564.1 | 2 | 49 | Remapped | NT_187564.1 |
| NT_187653.1 | Chr7|NT_187653.1 | 18 | 651 | Remapped | NT_187653.1 |
| NW_017852930.1 | Chr7|NW_017852930.1 | 2 | 2 | Remapped | NW_017852930.1 |
| NW_018654714.1 | Chr7|NW_018654714.1 | 7 | 526 | Remapped | NW_018654714.1 |
| NW_018654715.1 | Chr7|NW_018654715.1 | 12 | 748 | Remapped | NW_018654715.1 |
| NW_019805493.1 | Chr7|NW_019805493.1 | 1 | 37 | Remapped | NW_019805493.1 |
| NT_187566.1 | Chr8|NT_187566.1 | 6 | 251 | Remapped | NT_187566.1 |
| NT_187567.1 | Chr8|NT_187567.1 | 2 | 10 | Remapped | NT_187567.1 |
| NT_187568.1 | Chr8|NT_187568.1 | 2 | 18 | Remapped | NT_187568.1 |
| NT_187570.1 | Chr8|NT_187570.1 | 19 | 1,099 | Remapped | NT_187570.1 |
| NT_187571.1 | Chr8|NT_187571.1 | 1 | 97 | Remapped | NT_187571.1 |
| NT_187572.1 | Chr8|NT_187572.1 | 1 | 2 | Remapped | NT_187572.1 |
| NT_187573.1 | Chr8|NT_187573.1 | 1 | 97 | Remapped | NT_187573.1 |
| NT_187574.1 | Chr8|NT_187574.1 | 1 | 97 | Remapped | NT_187574.1 |
| NT_187576.1 | Chr8|NT_187576.1 | 16 | 618 | Remapped | NT_187576.1 |
| NT_187577.1 | Chr8|NT_187577.1 | 6 | 246 | Remapped | NT_187577.1 |
| NW_018654717.1 | Chr8|NW_018654717.1 | 71 | 4,039 | Remapped | NW_018654717.1 |
| NT_187578.1 | Chr9|NT_187578.1 | 3 | 291 | Remapped | NT_187578.1 |
| NW_003315928.1 | Chr9|NW_003315928.1 | 2 | 134 | Remapped | NW_003315928.1 |
| NW_003315930.1 | Chr9|NW_003315930.1 | 2 | 18 | Remapped | NW_003315930.1 |
| NW_003315931.1 | Chr9|NW_003315931.1 | 1 | 32 | Remapped | NW_003315931.1 |
| NW_009646201.1 | Chr9|NW_009646201.1 | 5 | 485 | Remapped | NW_009646201.1 |
| NW_013171804.1 | Chr9|NW_013171804.1 | 2 | 99 | Remapped | NW_013171804.1 |
| NT_187579.1 | Chr10|NT_187579.1 | 35 | 2,256 | Remapped | NT_187579.1 |
| NT_187580.1 | Chr10|NT_187580.1 | 1 | 97 | Remapped | NT_187580.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 6 | 437 | Remapped | NW_003315934.1 |
| NW_003315935.1 | Chr10|NW_003315935.1 | 5 | 325 | Remapped | NW_003315935.1 |
| NW_009646202.1 | Chr10|NW_009646202.1 | 1 | 15 | Remapped | NW_009646202.1 |
| NW_013171806.1 | Chr10|NW_013171806.1 | 3 | 9 | Remapped | NW_013171806.1 |
| NW_013171807.1 | Chr10|NW_013171807.1 | 1 | 97 | Remapped | NW_013171807.1 |
| NT_187681.1 | Chr11|NT_187681.1 | 1 | 97 | Remapped | NT_187681.1 |
| NT_187657.1 | Chr11|NT_187657.1 | 2 | 102 | Remapped | NT_187657.1 |
| NT_187581.1 | Chr11|NT_187581.1 | 5 | 77 | Remapped | NT_187581.1 |
| NT_187583.1 | Chr11|NT_187583.1 | 2 | 98 | Remapped | NT_187583.1 |
| NT_187584.1 | Chr11|NT_187584.1 | 2 | 102 | Remapped | NT_187584.1 |
| NT_187585.1 | Chr11|NT_187585.1 | 1 | 97 | Remapped | NT_187585.1 |
| NT_187586.1 | Chr11|NT_187586.1 | 1 | 1 | Remapped | NT_187586.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 1 | 14 | Remapped | NW_003315936.1 |
| NW_003871073.1 | Chr11|NW_003871073.1 | 4 | 337 | Remapped | NW_003871073.1 |
| NW_003871074.1 | Chr11|NW_003871074.1 | 6 | 110 | Remapped | NW_003871074.1 |
| NW_009646203.1 | Chr11|NW_009646203.1 | 3 | 231 | Remapped | NW_009646203.1 |
| NW_011332695.1 | Chr11|NW_011332695.1 | 2 | 98 | Remapped | NW_011332695.1 |
| NW_013171808.1 | Chr11|NW_013171808.1 | 3 | 106 | Remapped | NW_013171808.1 |
| NW_015148966.1 | Chr11|NW_015148966.1 | 1 | 97 | Remapped | NW_015148966.1 |
| NW_017363816.1 | Chr11|NW_017363816.1 | 4 | 170 | Remapped | NW_017363816.1 |
| NW_019805495.1 | Chr11|NW_019805495.1 | 4 | 216 | Remapped | NW_019805495.1 |
| NW_019805496.1 | Chr11|NW_019805496.1 | 1 | 97 | Remapped | NW_019805496.1 |
| NW_019805497.1 | Chr11|NW_019805497.1 | 6 | 375 | Remapped | NW_019805497.1 |
| NW_019805498.1 | Chr11|NW_019805498.1 | 4 | 228 | Remapped | NW_019805498.1 |
| NT_187658.1 | Chr12|NT_187658.1 | 12 | 862 | Remapped | NT_187658.1 |
| NT_187587.1 | Chr12|NT_187587.1 | 14 | 710 | Remapped | NT_187587.1 |
| NT_187589.1 | Chr12|NT_187589.1 | 1 | 1 | Remapped | NT_187589.1 |
| NW_003315939.2 | Chr12|NW_003315939.2 | 2 | 194 | Remapped | NW_003315939.2 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 3 | 291 | Remapped | NW_003315941.1 |
| NW_003571049.1 | Chr12|NW_003571049.1 | 7 | 393 | Remapped | NW_003571049.1 |
| NW_003571050.1 | Chr12|NW_003571050.1 | 10 | 762 | Remapped | NW_003571050.1 |
| NW_009646204.1 | Chr12|NW_009646204.1 | 3 | 67 | Remapped | NW_009646204.1 |
| NW_011332696.1 | Chr12|NW_011332696.1 | 4 | 292 | Remapped | NW_011332696.1 |
| NW_015148967.1 | Chr12|NW_015148967.1 | 1 | 80 | Remapped | NW_015148967.1 |
| NW_018654718.1 | Chr12|NW_018654718.1 | 6 | 231 | Remapped | NW_018654718.1 |
| NW_018654720.1 | Chr12|NW_018654720.1 | 2 | 6 | Remapped | NW_018654720.1 |
| NT_187592.1 | Chr13|NT_187592.1 | 5 | 244 | Remapped | NT_187592.1 |
| NT_187594.1 | Chr13|NT_187594.1 | 14 | 710 | Remapped | NT_187594.1 |
| NT_187595.1 | Chr13|NT_187595.1 | 2 | 2 | Remapped | NT_187595.1 |
| NT_187597.1 | Chr13|NT_187597.1 | 1 | 2 | Remapped | NT_187597.1 |
| NW_011332698.1 | Chr13|NW_011332698.1 | 3 | 48 | Remapped | NW_011332698.1 |
| NW_011332699.1 | Chr13|NW_011332699.1 | 17 | 738 | Remapped | NW_011332699.1 |
| NW_013171810.1 | Chr13|NW_013171810.1 | 1 | 1 | Remapped | NW_013171810.1 |
| NT_113796.3 | Chr14|NT_113796.3 | 29 | 1,335 | Remapped | NT_113796.3 |
| NT_187380.1 | Chr14|NT_187380.1 | 1 | 80 | Remapped | NT_187380.1 |
| NT_187598.1 | Chr14|NT_187598.1 | 2 | 114 | Remapped | NT_187598.1 |
| NT_187599.1 | Chr14|NT_187599.1 | 1 | 1 | Remapped | NT_187599.1 |
| NT_187600.1 | Chr14|NT_187600.1 | 59 | 4,135 | Remapped | NT_187600.1 |
| NT_187601.1 | Chr14|NT_187601.1 | 6 | 175 | Remapped | NT_187601.1 |
| NW_018654721.1 | Chr14|NW_018654721.1 | 2 | 194 | Remapped | NW_018654721.1 |
| NW_018654722.1 | Chr14|NW_018654722.1 | 12 | 546 | Remapped | NW_018654722.1 |
| NT_187659.1 | Chr15|NT_187659.1 | 10 | 533 | Remapped | NT_187659.1 |
| NT_187660.1 | Chr15|NT_187660.1 | 61 | 3,138 | Remapped | NT_187660.1 |
| NT_187382.1 | Chr15|NT_187382.1 | 1 | 2 | Remapped | NT_187382.1 |
| NT_187602.1 | Chr15|NT_187602.1 | 1 | 2 | Remapped | NT_187602.1 |
| NT_187603.1 | Chr15|NT_187603.1 | 13 | 565 | Remapped | NT_187603.1 |
| NT_187604.1 | Chr15|NT_187604.1 | 13 | 715 | Remapped | NT_187604.1 |
| NT_187605.1 | Chr15|NT_187605.1 | 4 | 371 | Remapped | NT_187605.1 |
| NT_187606.1 | Chr15|NT_187606.1 | 13 | 473 | Remapped | NT_187606.1 |
| NW_003315943.1 | Chr15|NW_003315943.1 | 12 | 529 | Remapped | NW_003315943.1 |
| NW_011332701.1 | Chr15|NW_011332701.1 | 69 | 3,524 | Remapped | NW_011332701.1 |
| NW_012132920.1 | Chr15|NW_012132920.1 | 1 | 97 | Remapped | NW_012132920.1 |
| NT_187383.1 | Chr16|NT_187383.1 | 1 | 80 | Remapped | NT_187383.1 |
| NT_187607.1 | Chr16|NT_187607.1 | 104 | 5,543 | Remapped | NT_187607.1 |
| NT_187608.1 | Chr16|NT_187608.1 | 2 | 114 | Remapped | NT_187608.1 |
| NT_187609.1 | Chr16|NT_187609.1 | 1 | 32 | Remapped | NT_187609.1 |
| NT_187610.1 | Chr16|NT_187610.1 | 1 | 1 | Remapped | NT_187610.1 |
| NW_003315945.1 | Chr16|NW_003315945.1 | 4 | 275 | Remapped | NW_003315945.1 |
| NW_003315946.1 | Chr16|NW_003315946.1 | 1 | 97 | Remapped | NW_003315946.1 |
| NW_013171812.1 | Chr16|NW_013171812.1 | 1 | 2 | Remapped | NW_013171812.1 |
| NW_013171813.1 | Chr16|NW_013171813.1 | 3 | 226 | Remapped | NW_013171813.1 |
| NW_017852933.1 | Chr16|NW_017852933.1 | 35 | 1,989 | Remapped | NW_017852933.1 |
| NW_018654723.1 | Chr16|NW_018654723.1 | 1 | 80 | Remapped | NW_018654723.1 |
| NW_019805500.1 | Chr16|NW_019805500.1 | 3 | 102 | Remapped | NW_019805500.1 |
| NT_187661.1 | Chr17|NT_187661.1 | 10 | 391 | Remapped | NT_187661.1 |
| NT_187663.1 | Chr17|NT_187663.1 | 13 | 878 | Remapped | NT_187663.1 |
| NT_187664.1 | Chr17|NT_187664.1 | 2 | 19 | Remapped | NT_187664.1 |
| NW_003871093.1 | Chr17|NW_003871093.1 | 5 | 183 | Remapped | NW_003871093.1 |
| NT_167251.2 | Chr17|NT_167251.2 | 7 | 426 | Remapped | NT_167251.2 |
| NT_187384.1 | Chr17|NT_187384.1 | 1 | 97 | Remapped | NT_187384.1 |
| NT_187611.1 | Chr17|NT_187611.1 | 1 | 1 | Remapped | NT_187611.1 |
| NT_187612.1 | Chr17|NT_187612.1 | 2 | 69 | Remapped | NT_187612.1 |
| NT_187613.1 | Chr17|NT_187613.1 | 5 | 214 | Remapped | NT_187613.1 |
| NT_187614.1 | Chr17|NT_187614.1 | 37 | 1,846 | Remapped | NT_187614.1 |
| NT_187615.1 | Chr17|NT_187615.1 | 1 | 37 | Remapped | NT_187615.1 |
| NT_187616.1 | Chr17|NT_187616.1 | 1 | 17 | Remapped | NT_187616.1 |
| NW_003315952.3 | Chr17|NW_003315952.3 | 1 | 17 | Remapped | NW_003315952.3 |
| NW_003315953.2 | Chr17|NW_003315953.2 | 7 | 584 | Remapped | NW_003315953.2 |
| NW_003871091.1 | Chr17|NW_003871091.1 | 1 | 3 | Remapped | NW_003871091.1 |
| NW_003871092.1 | Chr17|NW_003871092.1 | 4 | 234 | Remapped | NW_003871092.1 |
| NW_016107299.1 | Chr17|NW_016107299.1 | 2 | 81 | Remapped | NW_016107299.1 |
| NW_017363817.1 | Chr17|NW_017363817.1 | 2 | 98 | Remapped | NW_017363817.1 |
| NW_017363818.1 | Chr17|NW_017363818.1 | 2 | 14 | Remapped | NW_017363818.1 |
| NW_017363819.1 | Chr17|NW_017363819.1 | 5 | 245 | Remapped | NW_017363819.1 |
| NW_019805501.1 | Chr17|NW_019805501.1 | 1 | 17 | Remapped | NW_019805501.1 |
| NT_187665.1 | Chr18|NT_187665.1 | 2 | 64 | Remapped | NT_187665.1 |
| NT_187666.1 | Chr18|NT_187666.1 | 2 | 33 | Remapped | NT_187666.1 |
| NT_187617.1 | Chr18|NT_187617.1 | 2 | 24 | Remapped | NT_187617.1 |
| NT_187618.1 | Chr18|NT_187618.1 | 3 | 60 | Remapped | NT_187618.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 2 | 64 | Remapped | NW_003315958.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 2 | 33 | Remapped | NW_003315961.1 |
| NW_014040928.1 | Chr18|NW_014040928.1 | 2 | 194 | Remapped | NW_014040928.1 |
| NW_018654724.1 | Chr18|NW_018654724.1 | 1 | 97 | Remapped | NW_018654724.1 |
| NW_019805502.1 | Chr18|NW_019805502.1 | 1 | 1 | Remapped | NW_019805502.1 |
| NW_019805503.1 | Chr18|NW_019805503.1 | 1 | 2 | Remapped | NW_019805503.1 |
| NT_187693.1 | Chr19|NT_187693.1 | 25 | 1,777 | Remapped | NT_187693.1 |
| NW_003571061.2 | Chr19|NW_003571061.2 | 13 | 1,085 | Remapped | NW_003571061.2 |
| NW_003571057.2 | Chr19|NW_003571057.2 | 3 | 195 | Remapped | NW_003571057.2 |
| NW_003571058.2 | Chr19|NW_003571058.2 | 3 | 195 | Remapped | NW_003571058.2 |
| NW_003571059.2 | Chr19|NW_003571059.2 | 3 | 195 | Remapped | NW_003571059.2 |
| NW_003571060.1 | Chr19|NW_003571060.1 | 19 | 1,290 | Remapped | NW_003571060.1 |
| NW_003571056.2 | Chr19|NW_003571056.2 | 3 | 195 | Remapped | NW_003571056.2 |
| NW_003571055.2 | Chr19|NW_003571055.2 | 9 | 697 | Remapped | NW_003571055.2 |
| NT_187620.1 | Chr19|NT_187620.1 | 7 | 298 | Remapped | NT_187620.1 |
| NW_003315962.1 | Chr19|NW_003315962.1 | 7 | 589 | Remapped | NW_003315962.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 3 | 196 | Remapped | NW_003315963.1 |
| NW_003315964.2 | Chr19|NW_003315964.2 | 3 | 204 | Remapped | NW_003315964.2 |
| NW_003315965.1 | Chr19|NW_003315965.1 | 6 | 469 | Remapped | NW_003315965.1 |
| NW_003571054.1 | Chr19|NW_003571054.1 | 18 | 1,273 | Remapped | NW_003571054.1 |
| NW_009646206.1 | Chr19|NW_009646206.1 | 4 | 328 | Remapped | NW_009646206.1 |
| NW_014040929.1 | Chr19|NW_014040929.1 | 4 | 147 | Remapped | NW_014040929.1 |
| NT_187628.1 | Chr21|NT_187628.1 | 1 | 3 | Remapped | NT_187628.1 |
| NW_003315967.2 | Chr21|NW_003315967.2 | 1 | 1 | Remapped | NW_003315967.2 |
| NW_003315968.2 | Chr21|NW_003315968.2 | 4 | 40 | Remapped | NW_003315968.2 |
| NW_003315970.2 | Chr21|NW_003315970.2 | 1 | 97 | Remapped | NW_003315970.2 |
| NT_187682.1 | Chr22|NT_187682.1 | 1 | 97 | Remapped | NT_187682.1 |
| NW_015148969.1 | Chr22|NW_015148969.1 | 2 | 123 | Remapped | NW_015148969.1 |
| NT_187387.1 | Chr22|NT_187387.1 | 3 | 178 | Remapped | NT_187387.1 |
| NT_187629.1 | Chr22|NT_187629.1 | 7 | 168 | Remapped | NT_187629.1 |
| NT_187630.1 | Chr22|NT_187630.1 | 3 | 146 | Remapped | NT_187630.1 |
| NT_187632.1 | Chr22|NT_187632.1 | 9 | 596 | Remapped | NT_187632.1 |
| NT_187633.1 | Chr22|NT_187633.1 | 7 | 491 | Remapped | NT_187633.1 |
| NW_009646209.1 | ChrY|NW_009646209.1 | 4 | 55 | Remapped | NW_009646209.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.10 | Chr1 | 2,291 | 122,720 | Remapped | NC_000001.10 |
| NC_000002.11 | Chr2 | 1,901 | 86,659 | Remapped | NC_000002.11 |
| NC_000003.11 | Chr3 | 1,122 | 44,917 | Remapped | NC_000003.11 |
| NC_000004.11 | Chr4 | 1,279 | 46,433 | Remapped | NC_000004.11 |
| NC_000005.9 | Chr5 | 1,479 | 61,733 | Remapped | NC_000005.9 |
| NC_000006.11 | Chr6 | 1,111 | 49,142 | Remapped | NC_000006.11 |
| NC_000007.13 | Chr7 | 1,522 | 76,018 | Remapped | NC_000007.13 |
| NC_000008.10 | Chr8 | 905 | 37,332 | Remapped | NC_000008.10 |
| NC_000009.11 | Chr9 | 1,823 | 79,416 | Remapped | NC_000009.11 |
| NC_000010.10 | Chr10 | 1,190 | 55,638 | Remapped | NC_000010.10 |
| NC_000011.9 | Chr11 | 1,043 | 45,969 | Remapped | NC_000011.9 |
| NC_000012.11 | Chr12 | 904 | 43,975 | Remapped | NC_000012.11 |
| NC_000013.10 | Chr13 | 808 | 31,076 | Remapped | NC_000013.10 |
| NC_000014.8 | Chr14 | 729 | 33,263 | Remapped | NC_000014.8 |
| NC_000015.9 | Chr15 | 817 | 43,552 | Remapped | NC_000015.9 |
| NC_000016.9 | Chr16 | 1,059 | 57,989 | Remapped | NC_000016.9 |
| NC_000017.10 | Chr17 | 790 | 46,404 | Remapped | NC_000017.10 |
| NC_000018.9 | Chr18 | 522 | 22,845 | Remapped | NC_000018.9 |
| NC_000019.9 | Chr19 | 567 | 37,394 | Remapped | NC_000019.9 |
| NC_000020.10 | Chr20 | 340 | 17,813 | Remapped | NC_000020.10 |
| NC_000021.8 | Chr21 | 306 | 12,750 | Remapped | NC_000021.8 |
| NC_000022.10 | Chr22 | 558 | 33,178 | Remapped | NC_000022.10 |
| NW_003315903.1 | Chr1|NW_003315903.1 | 1 | 14 | Remapped | NW_003315903.1 |
| NW_003315906.1 | Chr1|NW_003315906.1 | 2 | 105 | Remapped | NW_003315906.1 |
| NW_003571030.1 | Chr1|NW_003571030.1 | 2 | 129 | Remapped | NW_003571030.1 |
| NW_003871055.3 | Chr1|NW_003871055.3 | 154 | 9,668 | Remapped | NW_003871055.3 |
| NW_003871056.3 | Chr1|NW_003871056.3 | 35 | 2,243 | Remapped | NW_003871056.3 |
| NW_003871057.1 | Chr1|NW_003871057.1 | 12 | 372 | Remapped | NW_003871057.1 |
| NW_003315908.1 | Chr2|NW_003315908.1 | 1 | 97 | Remapped | NW_003315908.1 |
| NW_003571031.1 | Chr2|NW_003571031.1 | 15 | 675 | Remapped | NW_003571031.1 |
| NW_003571032.1 | Chr2|NW_003571032.1 | 67 | 3,241 | Remapped | NW_003571032.1 |
| NW_004504299.1 | Chr2|NW_004504299.1 | 4 | 196 | Remapped | NW_004504299.1 |
| NW_003315910.1 | Chr3|NW_003315910.1 | 1 | 97 | Remapped | NW_003315910.1 |
| NW_003315913.1 | Chr3|NW_003315913.1 | 1 | 17 | Remapped | NW_003315913.1 |
| NW_003871058.1 | Chr3|NW_003871058.1 | 3 | 195 | Remapped | NW_003871058.1 |
| NW_003871060.1 | Chr3|NW_003871060.1 | 3 | 119 | Remapped | NW_003871060.1 |
| NT_167250.1 | Chr4|NT_167250.1 | 12 | 859 | Remapped | NT_167250.1 |
| NW_003315914.1 | Chr4|NW_003315914.1 | 1 | 2 | Remapped | NW_003315914.1 |
| NW_003315915.1 | Chr4|NW_003315915.1 | 3 | 37 | Remapped | NW_003315915.1 |
| NW_003315916.1 | Chr4|NW_003315916.1 | 1 | 1 | Remapped | NW_003315916.1 |
| NW_003571034.1 | Chr4|NW_003571034.1 | 13 | 320 | Remapped | NW_003571034.1 |
| NW_004775427.1 | Chr4|NW_004775427.1 | 18 | 1,201 | Remapped | NW_004775427.1 |
| NW_003315917.2 | Chr5|NW_003315917.2 | 12 | 343 | Remapped | NW_003315917.2 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 2 | 34 | Remapped | NW_003315920.1 |
| NW_003571036.1 | Chr5|NW_003571036.1 | 4 | 193 | Remapped | NW_003571036.1 |
| NW_003871061.1 | Chr5|NW_003871061.1 | 1 | 1 | Remapped | NW_003871061.1 |
| NW_004775428.1 | Chr5|NW_004775428.1 | 34 | 2,859 | Remapped | NW_004775428.1 |
| NT_113891.2 | Chr6|NT_113891.2 | 1 | 97 | Remapped | NT_113891.2 |
| NT_167244.1 | Chr6|NT_167244.1 | 14 | 637 | Remapped | NT_167244.1 |
| NT_167245.1 | Chr6|NT_167245.1 | 34 | 1,832 | Remapped | NT_167245.1 |
| NT_167246.1 | Chr6|NT_167246.1 | 47 | 2,902 | Remapped | NT_167246.1 |
| NT_167247.1 | Chr6|NT_167247.1 | 32 | 1,919 | Remapped | NT_167247.1 |
| NT_167248.1 | Chr6|NT_167248.1 | 2 | 104 | Remapped | NT_167248.1 |
| NT_167249.1 | Chr6|NT_167249.1 | 42 | 2,346 | Remapped | NT_167249.1 |
| NW_003315921.1 | Chr6|NW_003315921.1 | 1 | 97 | Remapped | NW_003315921.1 |
| NW_004070866.1 | Chr6|NW_004070866.1 | 10 | 565 | Remapped | NW_004070866.1 |
| NW_004504300.1 | Chr6|NW_004504300.1 | 2 | 30 | Remapped | NW_004504300.1 |
| NW_003571037.1 | Chr7|NW_003571037.1 | 6 | 359 | Remapped | NW_003571037.1 |
| NW_003571038.1 | Chr7|NW_003571038.1 | 6 | 394 | Remapped | NW_003571038.1 |
| NW_003571039.1 | Chr7|NW_003571039.1 | 10 | 465 | Remapped | NW_003571039.1 |
| NW_003571040.1 | Chr7|NW_003571040.1 | 42 | 2,384 | Remapped | NW_003571040.1 |
| NW_003571041.1 | Chr7|NW_003571041.1 | 1 | 17 | Remapped | NW_003571041.1 |
| NW_003871064.1 | Chr7|NW_003871064.1 | 82 | 4,355 | Remapped | NW_003871064.1 |
| NW_003871065.1 | Chr7|NW_003871065.1 | 2 | 114 | Remapped | NW_003871065.1 |
| NW_004775430.1 | Chr7|NW_004775430.1 | 24 | 1,871 | Remapped | NW_004775430.1 |
| NW_003315923.1 | Chr8|NW_003315923.1 | 1 | 97 | Remapped | NW_003315923.1 |
| NW_003571042.1 | Chr8|NW_003571042.1 | 15 | 569 | Remapped | NW_003571042.1 |
| NW_004775431.1 | Chr8|NW_004775431.1 | 1 | 1 | Remapped | NW_004775431.1 |
| NW_003315925.1 | Chr9|NW_003315925.1 | 5 | 485 | Remapped | NW_003315925.1 |
| NW_003315928.1 | Chr9|NW_003315928.1 | 2 | 134 | Remapped | NW_003315928.1 |
| NW_003315930.1 | Chr9|NW_003315930.1 | 2 | 18 | Remapped | NW_003315930.1 |
| NW_003315931.1 | Chr9|NW_003315931.1 | 1 | 32 | Remapped | NW_003315931.1 |
| NW_003871067.1 | Chr9|NW_003871067.1 | 20 | 696 | Remapped | NW_003871067.1 |
| NW_004070869.1 | Chr9|NW_004070869.1 | 2 | 2 | Remapped | NW_004070869.1 |
| NW_004504301.1 | Chr9|NW_004504301.1 | 1 | 97 | Remapped | NW_004504301.1 |
| NW_003315932.1 | Chr10|NW_003315932.1 | 1 | 2 | Remapped | NW_003315932.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 4 | 243 | Remapped | NW_003315934.1 |
| NW_003315935.1 | Chr10|NW_003315935.1 | 5 | 325 | Remapped | NW_003315935.1 |
| NW_003571043.1 | Chr10|NW_003571043.1 | 7 | 177 | Remapped | NW_003571043.1 |
| NW_003871068.1 | Chr10|NW_003871068.1 | 101 | 5,942 | Remapped | NW_003871068.1 |
| NW_003871069.1 | Chr10|NW_003871069.1 | 2 | 166 | Remapped | NW_003871069.1 |
| NW_003871070.1 | Chr10|NW_003871070.1 | 3 | 195 | Remapped | NW_003871070.1 |
| NW_003871071.1 | Chr10|NW_003871071.1 | 4 | 294 | Remapped | NW_003871071.1 |
| NW_004504302.1 | Chr10|NW_004504302.1 | 20 | 1,275 | Remapped | NW_004504302.1 |
| NW_004775432.1 | Chr10|NW_004775432.1 | 4 | 36 | Remapped | NW_004775432.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 1 | 14 | Remapped | NW_003315936.1 |
| NW_003571045.1 | Chr11|NW_003571045.1 | 24 | 1,185 | Remapped | NW_003571045.1 |
| NW_003871072.2 | Chr11|NW_003871072.2 | 5 | 217 | Remapped | NW_003871072.2 |
| NW_003871073.1 | Chr11|NW_003871073.1 | 4 | 337 | Remapped | NW_003871073.1 |
| NW_003871074.1 | Chr11|NW_003871074.1 | 6 | 110 | Remapped | NW_003871074.1 |
| NW_003871075.1 | Chr11|NW_003871075.1 | 3 | 117 | Remapped | NW_003871075.1 |
| NW_003871076.1 | Chr11|NW_003871076.1 | 3 | 231 | Remapped | NW_003871076.1 |
| NW_003871078.1 | Chr11|NW_003871078.1 | 3 | 39 | Remapped | NW_003871078.1 |
| NW_003871079.1 | Chr11|NW_003871079.1 | 5 | 393 | Remapped | NW_003871079.1 |
| NW_003871082.1 | Chr11|NW_003871082.1 | 1 | 97 | Remapped | NW_003871082.1 |
| NW_004070871.1 | Chr11|NW_004070871.1 | 2 | 12 | Remapped | NW_004070871.1 |
| NW_003315939.1 | Chr12|NW_003315939.1 | 2 | 194 | Remapped | NW_003315939.1 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 3 | 291 | Remapped | NW_003315941.1 |
| NW_003571048.1 | Chr12|NW_003571048.1 | 3 | 251 | Remapped | NW_003571048.1 |
| NW_003571049.1 | Chr12|NW_003571049.1 | 4 | 142 | Remapped | NW_003571049.1 |
| NW_003571050.1 | Chr12|NW_003571050.1 | 1 | 97 | Remapped | NW_003571050.1 |
| NW_003871083.2 | Chr12|NW_003871083.2 | 2 | 114 | Remapped | NW_003871083.2 |
| NW_004504303.2 | Chr12|NW_004504303.2 | 1 | 17 | Remapped | NW_004504303.2 |
| NW_003571051.1 | Chr13|NW_003571051.1 | 1 | 97 | Remapped | NW_003571051.1 |
| NW_004166863.1 | Chr14|NW_004166863.1 | 56 | 3,860 | Remapped | NW_004166863.1 |
| NW_003315943.1 | Chr15|NW_003315943.1 | 10 | 517 | Remapped | NW_003315943.1 |
| NW_003871084.1 | Chr15|NW_003871084.1 | 1 | 97 | Remapped | NW_003871084.1 |
| NW_003315945.1 | Chr16|NW_003315945.1 | 4 | 275 | Remapped | NW_003315945.1 |
| NW_003315946.1 | Chr16|NW_003315946.1 | 1 | 97 | Remapped | NW_003315946.1 |
| NT_167251.1 | Chr17|NT_167251.1 | 8 | 478 | Remapped | NT_167251.1 |
| NW_003315947.1 | Chr17|NW_003315947.1 | 4 | 292 | Remapped | NW_003315947.1 |
| NW_003315948.2 | Chr17|NW_003315948.2 | 7 | 363 | Remapped | NW_003315948.2 |
| NW_003315949.1 | Chr17|NW_003315949.1 | 21 | 937 | Remapped | NW_003315949.1 |
| NW_003315950.2 | Chr17|NW_003315950.2 | 25 | 1,386 | Remapped | NW_003315950.2 |
| NW_003315953.1 | Chr17|NW_003315953.1 | 7 | 584 | Remapped | NW_003315953.1 |
| NW_003871086.1 | Chr17|NW_003871086.1 | 5 | 324 | Remapped | NW_003871086.1 |
| NW_003871087.1 | Chr17|NW_003871087.1 | 2 | 101 | Remapped | NW_003871087.1 |
| NW_003871088.1 | Chr17|NW_003871088.1 | 11 | 972 | Remapped | NW_003871088.1 |
| NW_003871089.1 | Chr17|NW_003871089.1 | 2 | 34 | Remapped | NW_003871089.1 |
| NW_003871090.1 | Chr17|NW_003871090.1 | 2 | 98 | Remapped | NW_003871090.1 |
| NW_003871091.1 | Chr17|NW_003871091.1 | 1 | 3 | Remapped | NW_003871091.1 |
| NW_003871092.1 | Chr17|NW_003871092.1 | 1 | 97 | Remapped | NW_003871092.1 |
| NW_003871093.1 | Chr17|NW_003871093.1 | 2 | 46 | Remapped | NW_003871093.1 |
| NW_004070872.2 | Chr17|NW_004070872.2 | 11 | 309 | Remapped | NW_004070872.2 |
| NW_004166864.2 | Chr17|NW_004166864.2 | 2 | 194 | Remapped | NW_004166864.2 |
| NW_004775433.1 | Chr17|NW_004775433.1 | 10 | 737 | Remapped | NW_004775433.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 2 | 64 | Remapped | NW_003315958.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 2 | 33 | Remapped | NW_003315961.1 |
| NW_003315962.1 | Chr19|NW_003315962.1 | 7 | 589 | Remapped | NW_003315962.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 3 | 196 | Remapped | NW_003315963.1 |
| NW_003315964.2 | Chr19|NW_003315964.2 | 3 | 204 | Remapped | NW_003315964.2 |
| NW_003315965.1 | Chr19|NW_003315965.1 | 6 | 469 | Remapped | NW_003315965.1 |
| NW_003571053.2 | Chr19|NW_003571053.2 | 4 | 388 | Remapped | NW_003571053.2 |
| NW_003571060.1 | Chr19|NW_003571060.1 | 1 | 1 | Remapped | NW_003571060.1 |
| NW_003871094.1 | Chr19|NW_003871094.1 | 3 | 226 | Remapped | NW_003871094.1 |
| NW_004166865.1 | Chr19|NW_004166865.1 | 6 | 487 | Remapped | NW_004166865.1 |
| NW_004775434.1 | Chr19|NW_004775434.1 | 19 | 1,299 | Remapped | NW_004775434.1 |
| NW_004504304.1 | Chr20|NW_004504304.1 | 4 | 12 | Remapped | NW_004504304.1 |
| NW_003315967.1 | Chr21|NW_003315967.1 | 1 | 1 | Remapped | NW_003315967.1 |
| NW_003315968.1 | Chr21|NW_003315968.1 | 4 | 40 | Remapped | NW_003315968.1 |
| NW_003315970.1 | Chr21|NW_003315970.1 | 1 | 97 | Remapped | NW_003315970.1 |
| NW_003871096.1 | Chr22|NW_003871096.1 | 1 | 97 | Remapped | NW_003871096.1 |
| NW_004070873.1 | Chr22|NW_004070873.1 | 5 | 195 | Remapped | NW_004070873.1 |
| NW_004070874.1 | Chr22|NW_004070874.1 | 4 | 123 | Remapped | NW_004070874.1 |
| NW_004070875.1 | Chr22|NW_004070875.1 | 8 | 471 | Remapped | NW_004070875.1 |
| NW_004070876.1 | Chr22|NW_004070876.1 | 9 | 277 | Remapped | NW_004070876.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.9 | Chr1 | 2,297 | 122,957 | Submitted | NC_000001.9 |
| NC_000002.10 | Chr2 | 1,901 | 86,659 | Submitted | NC_000002.10 |
| NC_000003.10 | Chr3 | 1,122 | 44,917 | Submitted | NC_000003.10 |
| NC_000004.10 | Chr4 | 1,288 | 46,776 | Submitted | NC_000004.10 |
| NC_000005.8 | Chr5 | 1,479 | 61,733 | Submitted | NC_000005.8 |
| NC_000006.10 | Chr6 | 1,111 | 49,142 | Submitted | NC_000006.10 |
| NC_000007.12 | Chr7 | 1,549 | 77,114 | Submitted | NC_000007.12 |
| NC_000008.9 | Chr8 | 910 | 37,717 | Submitted | NC_000008.9 |
| NC_000009.10 | Chr9 | 1,822 | 79,384 | Submitted | NC_000009.10 |
| NC_000010.9 | Chr10 | 1,186 | 55,460 | Submitted | NC_000010.9 |
| NC_000011.8 | Chr11 | 1,043 | 45,969 | Submitted | NC_000011.8 |
| NC_000012.10 | Chr12 | 907 | 44,226 | Submitted | NC_000012.10 |
| NC_000013.9 | Chr13 | 808 | 31,076 | Submitted | NC_000013.9 |
| NC_000014.7 | Chr14 | 731 | 33,450 | Submitted | NC_000014.7 |
| NC_000015.8 | Chr15 | 819 | 43,651 | Submitted | NC_000015.8 |
| NC_000016.8 | Chr16 | 1,055 | 57,827 | Submitted | NC_000016.8 |
| NC_000017.9 | Chr17 | 809 | 47,196 | Submitted | NC_000017.9 |
| NC_000018.8 | Chr18 | 522 | 22,845 | Submitted | NC_000018.8 |
| NC_000019.8 | Chr19 | 574 | 37,882 | Submitted | NC_000019.8 |
| NC_000020.9 | Chr20 | 340 | 17,813 | Submitted | NC_000020.9 |
| NC_000021.7 | Chr21 | 306 | 12,750 | Submitted | NC_000021.7 |
| NC_000022.9 | Chr22 | 558 | 33,089 | Submitted | NC_000022.9 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| CM000550.1 | Chr1 | 162 | 10,006 | Submitted | CM000550.1 |
| CM000551.1 | Chr2A | 145 | 7,858 | Submitted | CM000551.1 |
| CM000552.1 | Chr2B | 117 | 6,846 | Submitted | CM000552.1 |
| CM000553.1 | Chr3 | 150 | 8,249 | Submitted | CM000553.1 |
| CM000554.1 | Chr4 | 224 | 13,602 | Submitted | CM000554.1 |
| CM000555.1 | Chr5 | 212 | 12,809 | Submitted | CM000555.1 |
| CM000556.1 | Chr6 | 182 | 10,760 | Submitted | CM000556.1 |
| CM000557.1 | Chr7 | 195 | 11,170 | Submitted | CM000557.1 |
| CM000558.1 | Chr8 | 200 | 11,359 | Submitted | CM000558.1 |
| CM000559.1 | Chr9 | 126 | 7,659 | Submitted | CM000559.1 |
| CM000560.1 | Chr10 | 160 | 9,544 | Submitted | CM000560.1 |
| CM000561.1 | Chr11 | 169 | 10,919 | Submitted | CM000561.1 |
| CM000562.1 | Chr12 | 132 | 7,849 | Submitted | CM000562.1 |
| CM000563.1 | Chr13 | 135 | 7,806 | Submitted | CM000563.1 |
| CM000564.1 | Chr14 | 113 | 6,692 | Submitted | CM000564.1 |
| CM000565.1 | Chr15 | 76 | 4,278 | Submitted | CM000565.1 |
| CM000566.1 | Chr16 | 100 | 5,488 | Submitted | CM000566.1 |
| CM000567.1 | Chr17 | 42 | 2,018 | Submitted | CM000567.1 |
| CM000568.1 | Chr18 | 102 | 5,869 | Submitted | CM000568.1 |
| CM000569.1 | Chr19 | 79 | 5,400 | Submitted | CM000569.1 |
| CM000570.1 | Chr20 | 48 | 2,360 | Submitted | CM000570.1 |
| CM000571.1 | Chr21 | 67 | 4,464 | Submitted | CM000571.1 |
| CM000572.1 | Chr22 | 64 | 4,449 | Submitted | CM000572.1 |
| Chr1_random | 147 | 9,959 | Submitted | ||
| Chr2a_random | 16 | 940 | Submitted | ||
| Chr2b_random | 20 | 1,085 | Submitted | ||
| Chr3_random | 14 | 610 | Submitted | ||
| Chr4_random | 28 | 1,592 | Submitted | ||
| Chr5_random | 24 | 1,723 | Submitted | ||
| Chr6_random | 18 | 994 | Submitted | ||
| Chr7_random | 15 | 992 | Submitted | ||
| Chr8_random | 25 | 1,479 | Submitted | ||
| Chr9_random | 8 | 287 | Submitted | ||
| Chr10_random | 21 | 1,096 | Submitted | ||
| Chr11_random | 23 | 1,427 | Submitted | ||
| Chr12_random | 42 | 3,020 | Submitted | ||
| Chr13_random | 14 | 811 | Submitted | ||
| Chr14_random | 15 | 1,065 | Submitted | ||
| Chr15_random | 7 | 491 | Submitted | ||
| Chr16_random | 25 | 1,590 | Submitted | ||
| Chr17_random | 22 | 1,329 | Submitted | ||
| Chr18_random | 16 | 738 | Submitted | ||
| Chr19_random | 16 | 1,210 | Submitted | ||
| Chr20_random | 2 | 128 | Submitted | ||
| Chr21_random | 5 | 368 | Submitted | ||
| Chr22_random | 17 | 1,258 | Submitted | ||
| EQ932644.1 | Chr6_qbl_hap2|EQ932644.1 | 1 | 80 | Submitted | EQ932644.1 |
| EQ932628.1 | Chr6_cox_hap1|EQ932628.1 | 2 | 160 | Submitted | EQ932628.1 |
| Chr6_cox_hap1_random | 1 | 43 | Submitted | ||
| Unplaced | 166 | 10,809 | Submitted |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| CM000314.2 | Chr1 | 88 | 1,128 | Submitted | CM000314.2 |
| CM000315.2 | Chr2A | 64 | 783 | Submitted | CM000315.2 |
| CM000316.2 | Chr2B | 74 | 851 | Submitted | CM000316.2 |
| CM000317.2 | Chr3 | 111 | 1,320 | Submitted | CM000317.2 |
| CM000318.2 | Chr4 | 113 | 1,364 | Submitted | CM000318.2 |
| CM000319.2 | Chr5 | 93 | 1,133 | Submitted | CM000319.2 |
| CM000320.2 | Chr6 | 87 | 1,118 | Submitted | CM000320.2 |
| CM000321.3 | Chr7 | 88 | 1,150 | Submitted | CM000321.3 |
| CM000322.3 | Chr8 | 84 | 957 | Submitted | CM000322.3 |
| CM000323.2 | Chr9 | 54 | 704 | Submitted | CM000323.2 |
| CM000324.2 | Chr10 | 66 | 770 | Submitted | CM000324.2 |
| CM000325.2 | Chr11 | 67 | 823 | Submitted | CM000325.2 |
| CM000326.2 | Chr12 | 65 | 891 | Submitted | CM000326.2 |
| CM000327.2 | Chr13 | 49 | 562 | Submitted | CM000327.2 |
| CM000328.2 | Chr14 | 33 | 444 | Submitted | CM000328.2 |
| CM000329.2 | Chr15 | 40 | 457 | Submitted | CM000329.2 |
| CM000330.2 | Chr16 | 44 | 709 | Submitted | CM000330.2 |
| CM000331.2 | Chr17 | 29 | 368 | Submitted | CM000331.2 |
| CM000332.2 | Chr18 | 46 | 522 | Submitted | CM000332.2 |
| CM000333.2 | Chr19 | 19 | 205 | Submitted | CM000333.2 |
| CM000334.3 | Chr20 | 27 | 296 | Submitted | CM000334.3 |
| BA000046.3 | Chr21 | 13 | 160 | Submitted | BA000046.3 |
| CM000335.2 | Chr22 | 6 | 64 | Submitted | CM000335.2 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.9 | Chr1 | 2,297 | 2,076 | 27 | 8 | 1 | 185 | 122,957 | 109,741 | 1,888 | 474 | 1 | 10,853 |
| NC_000002.10 | Chr2 | 1,901 | 1,779 | 14 | 13 | 0 | 95 | 86,659 | 80,086 | 630 | 741 | 0 | 5,202 |
| NC_000003.10 | Chr3 | 1,122 | 1,102 | 6 | 1 | 0 | 13 | 44,917 | 43,972 | 226 | 128 | 0 | 591 |
| NC_000004.10 | Chr4 | 1,288 | 1,241 | 11 | 0 | 0 | 36 | 46,776 | 44,187 | 622 | 0 | 0 | 1,967 |
| NC_000005.8 | Chr5 | 1,479 | 1,419 | 3 | 4 | 0 | 53 | 61,733 | 57,928 | 146 | 229 | 0 | 3,430 |
| NC_000006.10 | Chr6 | 1,111 | 1,015 | 10 | 0 | 0 | 86 | 49,142 | 43,954 | 277 | 0 | 0 | 4,911 |
| NC_000007.12 | Chr7 | 1,549 | 1,349 | 28 | 12 | 2 | 158 | 77,114 | 65,785 | 1,132 | 674 | 98 | 9,425 |
| NC_000008.9 | Chr8 | 910 | 879 | 17 | 2 | 0 | 12 | 37,717 | 36,487 | 754 | 194 | 0 | 282 |
| NC_000009.10 | Chr9 | 1,822 | 1,739 | 40 | 4 | 0 | 39 | 79,384 | 75,441 | 2,172 | 200 | 0 | 1,571 |
| NC_000010.9 | Chr10 | 1,186 | 1,024 | 10 | 3 | 0 | 149 | 55,460 | 45,865 | 786 | 188 | 0 | 8,621 |
| NC_000011.8 | Chr11 | 1,043 | 981 | 5 | 0 | 0 | 57 | 45,969 | 42,990 | 227 | 0 | 0 | 2,752 |
| NC_000012.10 | Chr12 | 907 | 894 | 2 | 1 | 0 | 10 | 44,226 | 43,386 | 114 | 11 | 0 | 715 |
| NC_000013.9 | Chr13 | 808 | 804 | 3 | 0 | 0 | 1 | 31,076 | 30,879 | 100 | 0 | 0 | 97 |
| NC_000014.7 | Chr14 | 731 | 658 | 11 | 1 | 0 | 61 | 33,450 | 28,725 | 563 | 97 | 0 | 4,065 |
| NC_000015.8 | Chr15 | 819 | 791 | 14 | 3 | 1 | 10 | 43,651 | 41,845 | 1,045 | 242 | 2 | 517 |
| NC_000016.8 | Chr16 | 1,055 | 1,025 | 2 | 1 | 0 | 27 | 57,827 | 55,770 | 18 | 1 | 0 | 2,038 |
| NC_000017.9 | Chr17 | 809 | 709 | 12 | 11 | 1 | 76 | 47,196 | 41,768 | 513 | 493 | 3 | 4,419 |
| NC_000018.8 | Chr18 | 522 | 511 | 2 | 0 | 0 | 9 | 22,845 | 22,513 | 91 | 0 | 0 | 241 |
| NC_000019.8 | Chr19 | 574 | 522 | 7 | 0 | 0 | 45 | 37,882 | 34,109 | 402 | 0 | 0 | 3,371 |
| NC_000020.9 | Chr20 | 340 | 332 | 2 | 0 | 0 | 6 | 17,813 | 17,606 | 81 | 0 | 0 | 126 |
| NC_000021.7 | Chr21 | 306 | 298 | 2 | 0 | 0 | 6 | 12,750 | 12,483 | 129 | 0 | 0 | 138 |
| NC_000022.9 | Chr22 | 558 | 533 | 2 | 3 | 0 | 20 | 33,089 | 31,953 | 81 | 195 | 0 | 860 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.9 | Chr1 | 2,297 | 1,829 | 303 | 63 | 15 | 87 | 122,957 | 94,406 | 18,549 | 4,745 | 967 | 4,290 |
| NC_000002.10 | Chr2 | 1,901 | 1,758 | 44 | 11 | 1 | 87 | 86,659 | 79,715 | 2,410 | 810 | 5 | 3,719 |
| NC_000003.10 | Chr3 | 1,122 | 1,064 | 4 | 0 | 0 | 54 | 44,917 | 41,900 | 371 | 0 | 0 | 2,646 |
| NC_000004.10 | Chr4 | 1,288 | 1,240 | 23 | 1 | 0 | 24 | 46,776 | 44,289 | 1,530 | 1 | 0 | 956 |
| NC_000005.8 | Chr5 | 1,479 | 1,389 | 13 | 4 | 0 | 73 | 61,733 | 58,396 | 442 | 229 | 0 | 2,666 |
| NC_000006.10 | Chr6 | 1,111 | 995 | 17 | 4 | 1 | 94 | 49,142 | 43,152 | 624 | 308 | 80 | 4,978 |
| NC_000007.12 | Chr7 | 1,549 | 1,339 | 94 | 27 | 1 | 88 | 77,114 | 65,666 | 4,946 | 1,544 | 80 | 4,878 |
| NC_000008.9 | Chr8 | 910 | 776 | 15 | 6 | 2 | 111 | 37,717 | 31,033 | 419 | 392 | 64 | 5,809 |
| NC_000009.10 | Chr9 | 1,822 | 1,615 | 150 | 39 | 3 | 15 | 79,384 | 70,172 | 5,889 | 2,172 | 109 | 1,042 |
| NC_000010.9 | Chr10 | 1,186 | 1,059 | 63 | 12 | 0 | 52 | 55,460 | 47,638 | 3,931 | 655 | 0 | 3,236 |
| NC_000011.8 | Chr11 | 1,043 | 982 | 11 | 1 | 1 | 48 | 45,969 | 43,277 | 207 | 97 | 32 | 2,356 |
| NC_000012.10 | Chr12 | 907 | 848 | 3 | 1 | 0 | 55 | 44,226 | 40,860 | 126 | 11 | 0 | 3,229 |
| NC_000013.9 | Chr13 | 808 | 779 | 6 | 1 | 0 | 22 | 31,076 | 30,016 | 207 | 1 | 0 | 852 |
| NC_000014.7 | Chr14 | 731 | 628 | 19 | 4 | 0 | 80 | 33,450 | 27,485 | 710 | 284 | 0 | 4,971 |
| NC_000015.8 | Chr15 | 819 | 693 | 21 | 3 | 0 | 102 | 43,651 | 37,180 | 954 | 242 | 0 | 5,275 |
| NC_000016.8 | Chr16 | 1,055 | 889 | 5 | 4 | 0 | 157 | 57,827 | 48,827 | 287 | 268 | 0 | 8,445 |
| NC_000017.9 | Chr17 | 809 | 688 | 30 | 10 | 2 | 79 | 47,196 | 41,197 | 1,302 | 644 | 100 | 3,953 |
| NC_000018.8 | Chr18 | 522 | 502 | 4 | 0 | 1 | 15 | 22,845 | 22,100 | 93 | 0 | 129 | 523 |
| NC_000019.8 | Chr19 | 574 | 495 | 23 | 1 | 0 | 55 | 37,882 | 32,838 | 1,232 | 97 | 0 | 3,715 |
| NC_000020.9 | Chr20 | 340 | 334 | 4 | 2 | 0 | 0 | 17,813 | 17,519 | 180 | 114 | 0 | 0 |
| NC_000021.7 | Chr21 | 306 | 271 | 11 | 0 | 0 | 24 | 12,750 | 11,532 | 339 | 0 | 0 | 879 |
| NC_000022.9 | Chr22 | 558 | 491 | 39 | 1 | 4 | 23 | 33,089 | 29,724 | 1,640 | 112 | 386 | 1,227 |
Samplesets
Number of Samplesets: 1
- Name:
- all_individuals
- Sampleset Type:
- Control
- Size:
- 97
- Organisms:
- Gorilla beringei graueri, Gorilla gorilla, Gorilla gorilla diehli, Gorilla gorilla gorilla, Homo sapiens, Homo sapiens subsp. 'Denisova', Pan paniscus, Pan troglodytes, Pan troglodytes ellioti, Pan troglodytes schweinfurthii, Pan troglodytes troglodytes, Pan troglodytes verus, Pongo abelii, Pongo pygmaeus
- Sampleset Phenotype(s):
- None reported
| Sample ID | Subject ID | Sex | Population | Subject Phenotype |
|---|---|---|---|---|
| SAMN01920520 | Pan_troglodytes_ellioti-Damian | Male | All great apes | Not reported |
| SAMN01920514 | Pan_paniscus-A926_Natalie | Female | All great apes | Not reported |
| SAMN01920525 | Pan_troglodytes_ellioti-Taweh | Male | All great apes | Not reported |
| Pan_paniscus-X00095_Kakowet | Pan_paniscus-X00095_Kakowet | Male | All great apes | Not reported |
| SAMN01920474 | Gorilla_beringei_graueri-A929_Kaisi | Male | All great apes | Not reported |
| SAMN01920537 | Pan_troglodytes_verus-9668_Bosco | Male | All great apes | Not reported |
| SAMN01920509 | Pan_paniscus-A919_Desmond | Male | All great apes | Not reported |
| SAMN01920495 | Gorilla_gorilla_gorilla-B647_Anthal | Female | All great apes | Not reported |
| SAMN01920479 | Gorilla_gorilla_gorilla-9750_Azizi | Female | All great apes | Not reported |
| SAMN01920536 | Pan_troglodytes_troglodytes-A960_Clara | Female | All great apes | Not reported |
| SAMN01920524 | Pan_troglodytes_ellioti-Paquita | Female | All great apes | Not reported |
| SAMN01920494 | Gorilla_gorilla_gorilla-B644_Paki | Female | All great apes | Not reported |
| Pan_paniscus-A920_Kidogo | Pan_paniscus-A920_Kidogo | Male | All great apes | Not reported |
| SAMN01920484 | Gorilla_gorilla_gorilla-A933_Dian | Female | All great apes | Not reported |
| Pongo_abelii-KB9258_Bubbles | Pongo_abelii-KB9258_Bubbles | Female | All great apes | Not reported |
| HGDP00778 | HGDP00778 | Male | Han | Not reported |
| SAMN01920483 | Gorilla_gorilla_gorilla-A932_Mimi | Female | All great apes | Not reported |
| SAMN01920480 | Gorilla_gorilla_gorilla-9752_Suzie | Female | All great apes | Not reported |
| Pongo_abelii-KB4361_Dennis | Pongo_abelii-KB4361_Dennis | Female | All great apes | Not reported |
| SAMN01920521 | Pan_troglodytes_ellioti-Julie | Female | All great apes | Not reported |
| SAMN01920498 | Gorilla_gorilla_gorilla-KB7973_Porta | Female | All great apes | Not reported |
| Pongo_pygmaeus-A942_Gusti | Pongo_pygmaeus-A942_Gusti | Female | All great apes | Not reported |
| HGDP01307 | HGDP01307 | Male | Dai | Not reported |
| SAMN01920501 | Gorilla_gorilla_gorilla-KB6039_Oko | Female | All great apes | Not reported |
| SAMN01920493 | Gorilla_gorilla_gorilla-B643_Choomba | Female | All great apes | Not reported |
| Pongo_abelii-KB4661_Dolly | Pongo_abelii-KB4661_Dolly | Male | All great apes | Not reported |
| SAMN01920476 | Gorilla_gorilla_dielhi-B646_Nyango | Female | All great apes | Not reported |
| SAMN01920547 | Pongo_pygmaeus-A939_Nonja | Female | All great apes | Not reported |
| SAMN01920502 | Gorilla_gorilla_gorilla-KB3784_Dolly | Female | All great apes | Not reported |
| Gorilla_gorilla_gorilla-Kamilah | Gorilla_gorilla_gorilla-Kamilah | Female | All great apes | Not reported |
| SAMN01920507 | Pan_paniscus-A917_Dzeeta | Female | All great apes | Not reported |
| SAMN01920539 | Pan_troglodytes_verus-X00100_Koby | Male | All great apes | Not reported |
| Pongo_pygmaeus-KB5406_Doris | Pongo_pygmaeus-KB5406_Doris | Female | All great apes | Not reported |
| SAMN01920544 | Pongo_abelii-A949_Dunja | Female | All great apes | Not reported |
| HGDP00542 | HGDP00542 | Male | Papuan | Not reported |
| Pan_troglodytes_schweinfurthii-Yolanda | Pan_troglodytes_schweinfurthii-Yolanda | Female | All great apes | Not reported |
| Pongo_abelii-A953_Vicki | Pongo_abelii-A953_Vicki | Female | All great apes | Not reported |
| SAMN01920503 | Gorilla_gorilla_gorilla-KB4986_Katie | Female | All great apes | Not reported |
| SAMN01920541 | Pan_troglodytes_verus-9730_Donald | Male | All great apes | Not reported |
| SAMN01920531 | Pan_troglodytes_schweinfurthii-A911_Kidongo | Female | All great apes | Not reported |
| SAMN01920490 | Gorilla_gorilla_gorilla-X00108_Abe | Male | All great apes | Not reported |
| SAMN01920497 | Gorilla_gorilla_gorilla-KB5792_Carolyn | Female | All great apes | Not reported |
| HGDP00456 | HGDP00456 | Male | Mbuti | Not reported |
| Pongo_pygmaeus-KB4204_Dinah | Pongo_pygmaeus-KB4204_Dinah | Male | All great apes | Not reported |
| SAMN01920540 | Pan_troglodytes_verus-Clint | Male | All great apes | Not reported |
| HGDP00665 | HGDP00665 | Male | Sardinian | Not reported |
| HGDP00521 | HGDP00521 | Male | French | Not reported |
| Gorilla_gorilla_gorilla-Snowflake | Gorilla_gorilla_gorilla-Snowflake | Male | All great apes | Not reported |
| SAMN01920528 | Pan_troglodytes_schweinfurthii-100040_Andromeda | Male | All great apes | Not reported |
| Pan_troglodytes_verus-A907_Susie_A | Pan_troglodytes_verus-A907_Susie_A | Female | All great apes | Not reported |
| SAMN01920491 | Gorilla_gorilla_gorilla-X00109_Tzambo | Male | All great apes | Not reported |
| SAMN01920542 | Pongo_abelii-A947_Elsi | Female | All great apes | Not reported |
| SAMN01920478 | Gorilla_gorilla_gorilla-9751_Bulera | Female | All great apes | Not reported |
| SAMN01920506 | Pan_paniscus-A915_Kosana | Female | All great apes | Not reported |
| Gorilla_gorilla_gorilla-A935_Fritz | Gorilla_gorilla_gorilla-A935_Fritz | Male | All great apes | Not reported |
| HGDP01029 | HGDP01029 | Male | San | Not reported |
| SAMN01920550 | Pongo_pygmaeus-A943_Tilda | Female | All great apes | Not reported |
| SAMN01920529 | Pan_troglodytes_schweinfurthii-9729_Harriet | Female | All great apes | Not reported |
| SAMN01920518 | Pan_troglodytes_ellioti-Banyo | Female | All great apes | Not reported |
| SAMN01920504 | Pan_paniscus-9731_LB502 | Female | All great apes | Not reported |
| Gorilla_gorilla_gorilla-9753_Kokomo | Gorilla_gorilla_gorilla-9753_Kokomo | Female | All great apes | Not reported |
| SAMN01920510 | Pan_paniscus-A922_Catherine | Female | All great apes | Not reported |
| Gorilla_gorilla_gorilla-Kwan | Gorilla_gorilla_gorilla-Kwan | Male | All great apes | Not reported |
| Pongo_pygmaeus-KB5405_Louis | Pongo_pygmaeus-KB5405_Louis | Male | All great apes | Not reported |
| SAMN01920511 | Pan_paniscus-A923_Kombote | Female | All great apes | Not reported |
| SAMN01920532 | Pan_troglodytes_schweinfurthii-A912_Nakuu | Female | All great apes | Not reported |
| SAMN01920500 | Gorilla_gorilla_gorilla-KB5852_Helen | Female | All great apes | Not reported |
| SAMN01920527 | Pan_troglodytes_schweinfurthii-100037_Vincent | Male | All great apes | Not reported |
| Gorilla_beringei_graueri-Mukisi | Gorilla_beringei_graueri-Mukisi | Male | All great apes | Not reported |
| SAMN01920526 | Pan_troglodytes_ellioti-Tobi | Female | All great apes | Not reported |
| SAMN01920513 | Pan_paniscus-A925_Bono | Male | All great apes | Not reported |
| Homo_denisova-Denisova_30x | Homo_denisova-Denisova_30x | Female | All great apes | Not reported |
| HGDP00998 | HGDP00998 | Male | Karitiana | Not reported |
| SAMN01920485 | Gorilla_gorilla_gorilla-A934_Delphi | Female | All great apes | Not reported |
| SAMN01920499 | Gorilla_gorilla_gorilla-KB3782_Vila | Female | All great apes | Not reported |
| Pan_paniscus-A951_Pongo | Pan_paniscus-A951_Pongo | Female | All great apes | Not reported |
| Pongo_abelii-SB550_Sibu | Pongo_abelii-SB550_Sibu | Female | All great apes | Not reported |
| HGDP00927 | HGDP00927 | Male | Yoruba | Not reported |
| Pongo_pygmaeus-KB5543_Baldy | Pongo_pygmaeus-KB5543_Baldy | Male | All great apes | Not reported |
| SAMN01920519 | Pan_troglodytes_ellioti-Basho | Male | All great apes | Not reported |
| SAMN01920487 | Gorilla_gorilla_gorilla-A936_Coco | Female | All great apes | Not reported |
| SAMN01920496 | Gorilla_gorilla_gorilla-B650_Katie | Female | All great apes | Not reported |
| SAMN01920508 | Pan_paniscus-A918_Hermien | Female | All great apes | Not reported |
| SAMN01920551 | Pongo_pygmaeus-A944_Napoleon | Male | All great apes | Not reported |
| SAMN01920516 | Pan_paniscus-A928_Kumbuka | Female | All great apes | Not reported |
| SAMN01920523 | Pan_troglodytes_ellioti-Koto | Male | All great apes | Not reported |
| Pongo_pygmaeus-KB5404_Billy | Pongo_pygmaeus-KB5404_Billy | Female | All great apes | Not reported |
| SAMN01920522 | Pan_troglodytes_ellioti-Kopongo | Female | All great apes | Not reported |
| SAMN01920477 | Gorilla_gorilla_gorilla-9749_Kowali | Female | All great apes | Not reported |
| SAMN01920473 | Gorilla_beringei_graueri-9732_Mkubwa | Male | All great apes | Not reported |
| SAMN01920534 | Pan_troglodytes_troglodytes-A958_Doris | Female | All great apes | Not reported |
| SAMN01920489 | Gorilla_gorilla_gorilla-A962_Amani | Female | All great apes | Not reported |
| SAMN01920517 | Pan_troglodytes_ellioti-Akwaya_Jean | Male | All great apes | Not reported |
| HGDP01284 | HGDP01284 | Male | Madenka | Not reported |
| Pongo_abelii-KB5883_Likoe | Pongo_abelii-KB5883_Likoe | Male | All great apes | Not reported |
| SAMN01920492 | Gorilla_gorilla_gorilla-B642_Akiba_Beri | Female | All great apes | Not reported |
| SAMN01920515 | Pan_paniscus-A927_Salonga | Female | All great apes | Not reported |
Experimental Details
| Experiment ID | Type | Method | Analysis | Number of Variant Calls |
|---|---|---|---|---|
| 1 | Discovery | Sequencing | Read depth | 72,781 |
| 2 | Discovery | Sequencing | Read depth | 820,141 |
| 3 | Discovery | Sequencing | Read depth | 181,278 |
| 4 | Discovery | Sequencing | Read depth | 239,696 |
| 5 | Discovery | Sequencing | Read depth | 4,062 |
| 6 | Discovery | Sequencing | Read depth | 1,481 |
| 7 | Discovery | Sequencing | Read depth | 5,521 |
| 8 | Discovery | Sequencing | Read depth | 1,310 |
| 9 | Discovery | Sequencing | Read depth | 1,735 |
| 10 | Discovery | Sequencing | Read depth | 1,324 |
| 11 | Validation | Oligo aCGH | Probe signal intensity | 206,589 |
Validations
| Experiment ID | Method | Analysis | Number of Variant Calls Validated |
|---|---|---|---|
| 11 | Oligo aCGH | Probe signal intensity | 206,589 |