Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv7067542

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,907,050

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 17100 SVs from 133 studies. See in: genome view

Submitted genomic23,549,781-28,456,830

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7067542	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	23,549,781	28,456,830
nsv7067542	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	23,794,928	28,701,976

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18755916	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18755916	Submitted genomic		NC_000015.10:g.235 49781_28456830inv	GRCh38 (hg38)		NC_000015.10	Chr15	23,549,781	28,456,830
nssv18755916	Remapped	Perfect	NC_000015.9:g.2379 4928_28701976inv	GRCh37.p13	First Pass	NC_000015.9	Chr15	23,794,928	28,701,976

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18755916	7e-06	2	276244

You are here: NCBI