Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv7065013

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,417

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 87 SVs from 30 studies. See in: genome view

Submitted genomic47,096,706-47,101,122

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7065013	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000012.12	Chr12	47,096,706	47,101,122
nsv7065013	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000012.11	Chr12	47,490,489	47,494,905

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18751860	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18751860	Submitted genomic		NC_000012.12:g.470 96706_47101122inv	GRCh38 (hg38)		NC_000012.12	Chr12	47,096,706	47,101,122
nssv18751860	Remapped	Perfect	NC_000012.11:g.474 90489_47494905inv	GRCh37.p13	First Pass	NC_000012.11	Chr12	47,490,489	47,494,905

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18751860	1.1e-05	3	273438

You are here: NCBI