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dbVar

Database of genomic structural variation

nsv7062147

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,262,606

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 5881 SVs from 106 studies. See in: genome view

Submitted genomic20,604,314-21,866,919

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7062147	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	20,604,314	21,866,919
nsv7062147	Remapped	Good	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	20,845,947	22,049,721

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18759981	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18759981	Submitted genomic		NC_000019.10:g.206 04314_21866919inv	GRCh38 (hg38)		NC_000019.10	Chr19	20,604,314	21,866,919
nssv18759981	Remapped	Good	NC_000019.9:g.2084 5947_22049721inv	GRCh37.p13	First Pass	NC_000019.9	Chr19	20,845,947	22,049,721

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18759981	6.8e-05	19	274454

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