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dbVar

Database of genomic structural variation

nsv7035022

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,220,799

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 7000 SVs from 106 studies. See in: genome view

Submitted genomic46,694,955-48,915,753

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7035022	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000020.11	Chr20	46,694,955	48,915,753
nsv7035022	Remapped	Good	GRCh37.p13	Primary Assembly	First Pass	NC_000020.10	Chr20	45,323,594	47,532,290

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18433739	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18433739	Submitted genomic		NC_000020.11:g.466 94955_48915753del	GRCh38 (hg38)		NC_000020.11	Chr20	46,694,955	48,915,753
nssv18433739	Remapped	Good	NC_000020.10:g.453 23594_47532290del	GRCh37.p13	First Pass	NC_000020.10	Chr20	45,323,594	47,532,290

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18433739	4e-06	1	275846

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