Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6987791

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:93,681

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 462 SVs from 56 studies. See in: genome view

Submitted genomic84,199,163-84,292,843

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6987791	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000016.10	Chr16	84,199,163	84,292,843
nsv6987791	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	84,232,769	84,326,449

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18403700	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18403700	Submitted genomic		NC_000016.10:g.841 99163_84292843del	GRCh38 (hg38)		NC_000016.10	Chr16	84,199,163	84,292,843
nssv18403700	Remapped	Perfect	NC_000016.9:g.8423 2769_84326449del	GRCh37.p13	First Pass	NC_000016.9	Chr16	84,232,769	84,326,449

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18403700	4e-06	1	276196

You are here: NCBI