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dbVar

Database of genomic structural variation

nsv6965548

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:168

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 177 SVs from 35 studies. See in: genome view

Submitted genomic84,646,659-84,646,826

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6965548	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	84,646,659	84,646,826
nsv6965548	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	85,189,890	85,190,057

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18397129	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18397129	Submitted genomic		NC_000015.10:g.846 46659_84646826del	GRCh38 (hg38)		NC_000015.10	Chr15	84,646,659	84,646,826
nssv18397129	Remapped	Perfect	NC_000015.9:g.8518 9890_85190057del	GRCh37.p13	First Pass	NC_000015.9	Chr15	85,189,890	85,190,057

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18397129	0.003	720	257846

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