Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6936637

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:35,960

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 236 SVs from 36 studies. See in: genome view

Submitted genomic4,814,779-4,850,738

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6936637	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000012.12	Chr12	4,814,779	4,850,738
nsv6936637	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000012.11	Chr12	4,923,945	4,959,904

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18361099	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18361099	Submitted genomic		NC_000012.12:g.481 4779_4850738del	GRCh38 (hg38)		NC_000012.12	Chr12	4,814,779	4,850,738
nssv18361099	Remapped	Perfect	NC_000012.11:g.492 3945_4959904del	GRCh37.p13	First Pass	NC_000012.11	Chr12	4,923,945	4,959,904

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18361099	<0.001	79	252048

You are here: NCBI