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dbVar

Database of genomic structural variation

nsv6935544

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:29

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 74 SVs from 13 studies. See in: genome view

Submitted genomic27,570,756-27,570,784

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6935544	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000013.11	Chr13	27,570,756	27,570,784
nsv6935544	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000013.10	Chr13	28,144,893	28,144,921

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18376762	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18376762	Submitted genomic		NC_000013.11:g.275 70756_27570784del	GRCh38 (hg38)		NC_000013.11	Chr13	27,570,756	27,570,784
nssv18376762	Remapped	Perfect	NC_000013.10:g.281 44893_28144921del	GRCh37.p13	First Pass	NC_000013.10	Chr13	28,144,893	28,144,921

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18376762	0.005	1091	250370

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