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dbVar

Database of genomic structural variation

nsv6917567

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:10,290

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 117 SVs from 28 studies. See in: genome view

Submitted genomic88,411,182-88,421,471

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6917567	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	88,411,182	88,421,471
nsv6917567	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	88,144,350	88,154,639

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18353600	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18353600	Submitted genomic		NC_000011.10:g.884 11182_88421471del	GRCh38 (hg38)		NC_000011.10	Chr11	88,411,182	88,421,471
nssv18353600	Remapped	Perfect	NC_000011.9:g.8814 4350_88154639del	GRCh37.p13	First Pass	NC_000011.9	Chr11	88,144,350	88,154,639

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18353600	<0.001	159	276076

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