nsv6910871
- Organism: Homo sapiens
- Study:nstd229 (Jun et al. 2023)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:42,799
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 336 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 336 SVs from 66 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv6910871 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 5,875,715 | 5,918,513 | ||
nsv6910871 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 5,896,945 | 5,939,743 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv18352727 | deletion | Sequencing | Split read and paired-end mapping |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv18352727 | Submitted genomic | NC_000011.10:g.587 5715_5918513del | GRCh38 (hg38) | NC_000011.10 | Chr11 | 5,875,715 | 5,918,513 | ||
nssv18352727 | Remapped | Perfect | NC_000011.9:g.5896 945_5939743del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 5,896,945 | 5,939,743 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv18352727 | 4e-06 | 1 | 274872 |